RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 UBE4BO95155 1302 aa24.11■■□□□ 1.45
CCM2-206ENST00000474617 B4DLN1 442 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 PES1O00541 588 aaKnown RBP24.1■■□□□ 1.45
CCM2-206ENST00000474617 ATP2A1O14983 1001 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 ZBED6P86452 979 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 MIIPQ5JXC2 388 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 CYP2W1Q8TAV3 490 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 RBM46Q8TBY0 533 aaKnown RBP24.1■■□□□ 1.45
CCM2-206ENST00000474617 ZNF592Q92610 1267 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 ODF2LQ9ULJ1 636 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 TRIM21P19474 475 aaKnown RBP24.1■■□□□ 1.45
CCM2-206ENST00000474617 SPP2Q13103 211 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 CPLX3Q8WVH0 158 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 NDST4Q9H3R1 872 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 L2HGDHQ9H9P8 463 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 SPON1Q9HCB6 807 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 TRAF3IP3Q9Y228 551 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 UBIAD1Q9Y5Z9 338 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 ADGRG1Q9Y653 693 aa24.1■■□□□ 1.45
CCM2-206ENST00000474617 VWA5AO00534 786 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 EIF3DO15371 548 aaKnown RBP eCLIP24.09■■□□□ 1.45
CCM2-206ENST00000474617 MAFGO15525 162 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 SLITRK3O94933 977 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 ALAS1P13196 640 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 GOLGA8FQ08AF8 430 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 GOLGA8DPQ0D2H9 430 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 PABPC4Q13310 644 aaKnown RBP eCLIP24.09■■□□□ 1.45
CCM2-206ENST00000474617 MEA1Q16626 185 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 SYTL5Q8TDW5 730 aaPredicted RBP24.09■■□□□ 1.45
CCM2-206ENST00000474617 HPS3Q969F9 1004 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 KLRG1Q96E93 195 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 TTYH3Q9C0H2 523 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 JADE2Q9NQC1 790 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 TMOD4Q9NZQ9 345 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 MYO1AQ9UBC5 1043 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 ADAMTS5Q9UNA0 930 aa24.09■■□□□ 1.45
CCM2-206ENST00000474617 EML1O00423 815 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 PDXKO00764 312 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 CALUO43852 315 aaPredicted RBP24.08■■□□□ 1.45
CCM2-206ENST00000474617 PTPN21Q16825 1174 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 EPM2AIP1Q7L775 607 aaPredicted RBP24.08■■□□□ 1.45
CCM2-206ENST00000474617 CCDC170Q8IYT3 715 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 NLGN2Q8NFZ4 835 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 SCFD1Q8WVM8 642 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 REEP2Q9BRK0 252 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 NUCKS1Q9H1E3 243 aaKnown RBP24.08■■□□□ 1.45
CCM2-206ENST00000474617 BHMT2Q9H2M3 363 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 KCTD10Q9H3F6 313 aa24.08■■□□□ 1.45
CCM2-206ENST00000474617 TTC26A0AVF1 554 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TRAF5O00463 557 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 CETN3O15182 167 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TAL1P17542 331 aaPredicted RBP24.07■■□□□ 1.44
CCM2-206ENST00000474617 RPL13P26373 211 aaKnown RBP24.07■■□□□ 1.44
CCM2-206ENST00000474617 TUBB2AQ13885 445 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 NFIL3Q16649 462 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TRIM65Q6PJ69 517 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TOGARAM2Q6ZUX3 1019 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 RDM1Q8NG50 284 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 UPF1Q92900 1129 aaKnown RBP eCLIP24.07■■□□□ 1.44
CCM2-206ENST00000474617 TUBB2BQ9BVA1 445 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TIPINQ9BVW5 301 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 RAVER2Q9HCJ3 691 aaKnown RBP24.07■■□□□ 1.44
CCM2-206ENST00000474617 GGA3Q9NZ52 723 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 TCEAL9Q9UHQ7 104 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 SMCHD1A6NHR9 2005 aa24.07■■□□□ 1.44
CCM2-206ENST00000474617 PARP14Q460N5 1801 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 ASTN2O75129 1339 aaPredicted RBP24.06■■□□□ 1.44
CCM2-206ENST00000474617 NFIBO00712 420 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 LYPLA2O95372 231 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 DSG3P32926 999 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 COG2Q14746 738 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 KNOP1Q1ED39 458 aaKnown RBP24.06■■□□□ 1.44
CCM2-206ENST00000474617 RINT1Q6NUQ1 792 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 SYT10Q6XYQ8 523 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 RNF207Q6ZRF8 634 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 ZNF662Q6ZS27 426 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 TRERF1Q96PN7 1200 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 HOXC10Q9NYD6 342 aa24.06■■□□□ 1.44
CCM2-206ENST00000474617 SOWAHDA6NJG2 315 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 STAM2O75886 525 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 GUCY2CP25092 1073 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 HNRNPH3P31942 346 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 PSMC6P62333 389 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 CYP4A11Q02928 519 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 CCDC40Q4G0X9 1142 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 SH3D19Q5HYK7 790 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 CPXCR1Q8N123 301 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 ERO1AQ96HE7 468 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 DYDC2Q96IM9 177 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 ZSWIM4Q9H7M6 989 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 ADARB2Q9NS39 739 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 KCNH7Q9NS40 1196 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 SLC16A3O15427 465 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 KIF5CO60282 957 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 P4HBP07237 508 aaKnown RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 ARP10275 920 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 ITGB5P18084 799 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 SFNP31947 248 aa24.05■■□□□ 1.44
CCM2-206ENST00000474617 CYLC1P35663 651 aaPredicted RBP24.05■■□□□ 1.44
CCM2-206ENST00000474617 KRT83P78385 493 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms