RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 SLC10A5Q5PT55 438 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 PPP4R3AQ6IN85 833 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 CCDC24Q8N4L8 307 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 WDR66Q8TBY9 1149 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 DNAJC19Q96DA6 116 aa15.63■□□□□ 0.09
NHLRC3-204ENST00000473371 USP17L5A8MUK1 530 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 CEP104O60308 925 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 TNNI2P48788 182 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 DDB1Q16531 1140 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 LRIG3Q6UXM1 1119 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 NEDD1Q8NHV4 660 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 MYBP10242 640 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 HSD17B3P37058 310 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 ECM1Q16610 540 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 TBC1D9BQ66K14 1250 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 TRIM59Q8IWR1 403 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 FRMPD2Q68DX3 1309 aaPredicted RBP15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 KIF4AO95239 1232 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 SMARCA1P28370 1054 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 GRIK5Q16478 980 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 OR2W6PQ8NHA6 318 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 LRRC45Q96CN5 670 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 CEP95Q96GE4 821 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 AIPL1Q9NZN9 384 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 BCCIPQ9P287 314 aaKnown RBP eCLIP15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 TMEM59LQ9UK28 342 aa15.62■□□□□ 0.09
NHLRC3-204ENST00000473371 CUL1Q13616 776 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 SEPT2Q15019 361 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 PTPROQ16827 1216 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 DDX42Q86XP3 938 aaKnown RBP eCLIP15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 PBKQ96KB5 322 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 FGFBP2Q9BYJ0 223 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 GOLPH3Q9H4A6 298 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 LDHCP07864 332 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 CTNNA1P35221 906 aaKnown RBP15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 PPP4CP60510 307 aa15.61■□□□□ 0.09
NHLRC3-204ENST00000473371 SRRM3A6NNA2 597 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 ODF2Q5BJF6 829 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 CCDC65Q8IXS2 484 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 PROCA1Q8NCQ7 364 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 AP1M1Q9BXS5 423 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 SNED1Q8TER0 1413 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 LOC102724159A0A0B4J2E5 919 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 CES2O00748 559 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 EDIL3O43854 480 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 USP11P51784 963 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 ACTN3Q08043 901 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 PWP2Q15269 919 aaKnown RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 IFI16Q16666 785 aaKnown RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 C16orf86Q6ZW13 317 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 GJA10Q969M2 543 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 CYFIP2Q96F07 1278 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 GANQ9H2C0 597 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 RIOX1Q9H6W3 641 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 VCPKMTQ9H867 229 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 NAV1Q8NEY1 1877 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 TMCO5BA8MYB1 307 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 hCG_1984214I3L0E3 225 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 ADAM9Q13443 819 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 HERC4Q5GLZ8 1057 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 CCDC121Q6ZUS5 278 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 NBPF5PQ86XG9 351 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 ZNF713Q8N859 430 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 EIF1ADQ8N9N8 165 aaKnown RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 SCFD2Q8WU76 684 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 UBLCP1Q8WVY7 318 aaPredicted RBP15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 SPAG5Q96R06 1193 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 GGA2Q9UJY4 613 aa15.6■□□□□ 0.09
NHLRC3-204ENST00000473371 ECHS1P30084 290 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 PTK2Q05397 1052 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 KCNH2Q12809 1159 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 UAP1Q16222 522 aaPredicted RBP15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 RUFY4Q6ZNE9 571 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 NYXQ9GZU5 481 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 ZHX3Q9H4I2 956 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 ANKIB1Q9P2G1 1089 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 MYH4Q9Y623 1939 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 GMNCA6NCL1 334 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 MAP2K2P36507 400 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 C10orf76Q5T2E6 689 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 CCDC13Q8IYE1 715 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 TEX11Q8IYF3 940 aa15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 DDX47Q9H0S4 455 aaKnown RBP15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 ZNF335Q9H4Z2 1342 aaPredicted RBP15.59■□□□□ 0.09
NHLRC3-204ENST00000473371 NPHP3-ACAD11A0A0J9YXS1 232 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 BTNL10A8MVZ5 291 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 E9PMD0 336 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 H0YGN5 161 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 PGRMC1O00264 195 aaKnown RBP15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 SART1O43290 800 aaKnown RBP15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 ACTN1P12814 892 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 BTDP43251 543 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 ZNF844Q08AG5 666 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 UBE2SQ16763 222 aa15.58■□□□□ 0.09
NHLRC3-204ENST00000473371 ZNF571Q7Z3V5 609 aaPredicted RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms