RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 IFIT1BQ5T764 474 aaKnown RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 MYSM1Q5VVJ2 828 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 FAM178BQ8IXR5 827 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 DBF4BQ8NFT6 615 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 ATP6V0A1Q93050 837 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 MRPL38Q96DV4 380 aaKnown RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 SAMD11Q96NU1 681 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 KRT23Q9C075 422 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 JMJD4Q9H9V9 463 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 DIAPH3Q9NSV4 1193 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 MAP3K20Q9NYL2 800 aaKnown RBP8.03□□□□□ -1.12
CKS1B-205ENST00000473344 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
CKS1B-205ENST00000473344 TCF20Q9UGU0 1960 aaKnown RBP8.02□□□□□ -1.12
CKS1B-205ENST00000473344 SCN10AQ9Y5Y9 1956 aa8.02□□□□□ -1.12
CKS1B-205ENST00000473344 COL4A4P53420 1690 aaPredicted RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 H3BRB1 525 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 TGFB3P10600 412 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 GNAT1P11488 350 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 IL9P15248 144 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 HSD17B4P51659 736 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 MBTPS1Q14703 1052 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 TCTN1Q2MV58 587 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 TRIM71Q2Q1W2 868 aaKnown RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 GNPTABQ3T906 1256 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 EPC2Q52LR7 807 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 TIGD5Q53EQ6 642 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 PLEKHG4Q58EX7 1191 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 CELF3Q5SZQ8 465 aaKnown RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 CWC27Q6UX04 472 aaKnown RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 SERINC5Q86VE9 423 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 HOMER1Q86YM7 354 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 ENAHQ8N8S7 591 aaPredicted RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 BANK1Q8NDB2 785 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 SEPT8Q92599 483 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 ANKS1AQ92625 1134 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 WNT8BQ93098 351 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 PDCD2LQ9BRP1 358 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 LNPKQ9C0E8 428 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 TUT1Q9H6E5 874 aaKnown RBP8.02□□□□□ -1.13
CKS1B-205ENST00000473344 CNNM2Q9H8M5 875 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 CD320Q9NPF0 282 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 C11orf16Q9NQ32 467 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 ZSWIM5Q9P217 1185 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 PCDHA1Q9Y5I3 950 aa8.02□□□□□ -1.13
CKS1B-205ENST00000473344 GRXCR2A6NFK2 248 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 KLRF2D3W0D1 207 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 H3BNC9 293 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 H3BQ06 376 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 GCOM1H8Y6P7 765 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 HIP1O00291 1037 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 ZBTB5O15062 677 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 CAND2O75155 1236 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 CTSHP09668 335 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 POLR2MP0CAP2 368 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 UBA1P22314 1058 aaKnown RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 CCND2P30279 289 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 HOXA13P31271 388 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 HTRA4P83105 476 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 GPM6BQ13491 265 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 HDAC1Q13547 482 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 LAPTM4AQ15012 233 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 PGM5Q15124 567 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 B4GALNT3Q6L9W6 998 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 TRAF7Q6Q0C0 670 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 STOX1Q6ZVD7 989 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 VSIG10LQ86VR7 867 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 FCHSD1Q86WN1 690 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 SAMD3Q8N6K7 520 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 TOP1MTQ969P6 601 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 PABPC5Q96DU9 382 aaKnown RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 USP26Q9BXU7 913 aa8.01□□□□□ -1.13
CKS1B-205ENST00000473344 IFIH1Q9BYX4 1025 aaKnown RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 NSUN3Q9H649 340 aaKnown RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 TSR3Q9UJK0 312 aaKnown RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 ZNF215Q9UL58 517 aaPredicted RBP8.01□□□□□ -1.13
CKS1B-205ENST00000473344 C5orf42Q9H799 3197 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 ERICH2A1L162 156 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 TREHO43280 583 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 DCXO43602 365 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 NCK2O43639 380 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 SMIM10L2AP0DMW4 78 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 SMIM10L2BP0DMW5 78 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 HOXD8P13378 290 aaPredicted RBP8□□□□□ -1.13
CKS1B-205ENST00000473344 RRP1P56182 461 aaKnown RBP8□□□□□ -1.13
CKS1B-205ENST00000473344 SP2Q02086 613 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 TRDNQ13061 729 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 NEDD9Q14511 834 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 HIC1Q14526 733 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
CKS1B-205ENST00000473344 PACS2Q86VP3 889 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 TMEM192Q8IY95 271 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 STAG2Q8N3U4 1231 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 NEK9Q8TD19 979 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 APBB2Q92870 758 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 C16orf70Q9BSU1 422 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 DSCC1Q9BVC3 393 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 UPF3BQ9BZI7 483 aaKnown RBP8□□□□□ -1.13
CKS1B-205ENST00000473344 RNPEPQ9H4A4 650 aa8□□□□□ -1.13
CKS1B-205ENST00000473344 CLDND1Q9NY35 253 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms