RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC37A4O43826 429 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 ZEB2O60315 1214 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 PQBP1O60828 265 aaKnown RBP14.91□□□□□ -0.02
TPM3-216ENST00000473036 PPFIA4O75335 1185 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 CABYRO75952 493 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 CCNE2O96020 404 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 F2P00734 622 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 CD4P01730 458 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 CLTBP09497 229 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 CYP3A7P24462 503 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 KRT2P35908 639 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 ZNF76P36508 570 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 USP11P51784 963 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 SP4Q02446 784 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 DGKDQ16760 1214 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 PRR16Q569H4 304 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 PIK3AP1Q6ZUJ8 805 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 FAM126BQ8IXS8 530 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 DIS3L2Q8IYB7 885 aaKnown RBP14.91□□□□□ -0.02
TPM3-216ENST00000473036 FBXO18Q8NFZ0 1043 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 MYLIPQ8WY64 445 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 VTI1AQ96AJ9 217 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 TOX2Q96NM4 488 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 PCYT2Q99447 389 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 TRPV6Q9H1D0 765 aa14.91□□□□□ -0.02
TPM3-216ENST00000473036 B4GALT4O60513 344 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 LGALS2P05162 132 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 HMGN5P82970 282 aaKnown RBP14.9□□□□□ -0.02
TPM3-216ENST00000473036 NONOQ15233 471 aaKnown RBP eCLIP14.9□□□□□ -0.021e-7■■■■□ 26.2
TPM3-216ENST00000473036 TJAP1Q5JTD0 557 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 KRT25Q7Z3Z0 450 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 CDHR1Q96JP9 859 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 C8orf76Q96K31 380 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 RNPC3Q96LT9 517 aaKnown RBP14.9□□□□□ -0.02
TPM3-216ENST00000473036 TRMT13Q9NUP7 481 aaKnown RBP14.9□□□□□ -0.02
TPM3-216ENST00000473036 NFASCO94856 1347 aa14.9□□□□□ -0.02
TPM3-216ENST00000473036 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.89□□□□□ -0.03
TPM3-216ENST00000473036 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.89□□□□□ -0.03
TPM3-216ENST00000473036 DDX39AO00148 427 aaKnown RBP14.89□□□□□ -0.03
TPM3-216ENST00000473036 KPNA6O60684 536 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 XBP1P17861 261 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 GJB2P29033 226 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 PSEN2P49810 448 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 Q4G0T1 1027 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 JPH1Q9HDC5 661 aaPredicted RBP14.89□□□□□ -0.03
TPM3-216ENST00000473036 TBX21Q9UL17 535 aa14.89□□□□□ -0.03
TPM3-216ENST00000473036 CCDC194A0A1B0GVG4 234 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 IPO5O00410 1097 aaKnown RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 ATG7O95352 703 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 RAG1P15918 1043 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 TCF7P36402 384 aaPredicted RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 ANP32AP39687 249 aaKnown RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 FPGSQ05932 587 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 MFSD10Q14728 455 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 KIAA0753Q2KHM9 967 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 LETM2Q2VYF4 491 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 BRDTQ58F21 947 aaPredicted RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 UTP14CQ5TAP6 766 aaKnown RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 GDF6Q6KF10 455 aaPredicted RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 GIMAP8Q8ND71 665 aaPredicted RBP14.88□□□□□ -0.03
TPM3-216ENST00000473036 ETNPPLQ8TBG4 499 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 SLC5A5Q92911 643 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 ZNF577Q9BSK1 485 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 HDAC6Q9UBN7 1215 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 SLC9A2Q9UBY0 812 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 MROH7Q68CQ1 1323 aa14.88□□□□□ -0.03
TPM3-216ENST00000473036 DCDC2CA8MYV0 355 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 H3BRB1 525 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
TPM3-216ENST00000473036 LGR5O75473 907 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 CHMP4BP1P59074 171 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 ACTR2P61160 394 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 ZNF200P98182 395 aaPredicted RBP14.87□□□□□ -0.03
TPM3-216ENST00000473036 SETQ01105 290 aaPredicted RBP14.87□□□□□ -0.03
TPM3-216ENST00000473036 BECN1Q14457 450 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 NFRKBQ6P4R8 1299 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 MOXD1Q6UVY6 613 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 B3GNT9Q6UX72 402 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 ABHD15Q6UXT9 468 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 NEK8Q86SG6 692 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 FAM184AQ8NB25 1140 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 HAS1Q92839 578 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 SNX21Q969T3 373 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 RNPEPQ9H4A4 650 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 TUT1Q9H6E5 874 aaKnown RBP14.87□□□□□ -0.03
TPM3-216ENST00000473036 UMODL1Q5DID0 1318 aa14.87□□□□□ -0.03
TPM3-216ENST00000473036 IGKV6D-21A0A0A0MT36 114 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 TNFRSF10AO00220 468 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 PSMD10O75832 226 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 CYP2C9P11712 490 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 DNAJB2P25686 324 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 HOXC8P31273 242 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 PPP4R3AQ6IN85 833 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 SESTD1Q86VW0 696 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 POTEDQ86YR6 584 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
TPM3-216ENST00000473036 SEPT1Q8WYJ6 367 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 WNT8BQ93098 351 aa14.86□□□□□ -0.03
TPM3-216ENST00000473036 VWCEQ96DN2 955 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms