RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 UHMK1Q8TAS1 419 aaKnown RBP5.49□□□□□ -1.53
PRPF40A-207ENST00000471701 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF40A-207ENST00000471701 MBD6Q96DN6 1003 aa5.49□□□□□ -1.53
PRPF40A-207ENST00000471701 ARHGAP20Q9P2F6 1191 aa5.49□□□□□ -1.53
PRPF40A-207ENST00000471701 NKRFO15226 690 aaKnown RBP eCLIP5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 STK10O94804 968 aaKnown RBP5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 LTFP02788 710 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 RBM25P49756 843 aaKnown RBP5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 EPHB4P54760 987 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 PFKPQ01813 784 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 PHF19Q5T6S3 580 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 STYK1Q6J9G0 422 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 PROSER1Q86XN7 944 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 CKAP2LQ8IYA6 745 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 NUDT10Q8NFP7 164 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 OSBP2Q969R2 916 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 NUDT11Q96G61 164 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 PDGFDQ9GZP0 370 aaPredicted RBP5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 ADAM29Q9UKF5 820 aa5.48□□□□□ -1.53
PRPF40A-207ENST00000471701 BLACEA4D250 179 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 TNFRSF1AP19438 455 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 ICAM4Q14773 271 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 NTRK3Q16288 839 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 Q6ZUG5 572 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 KCTD1Q719H9 257 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 SCUBE1Q8IWY4 988 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 NLGN4XQ8N0W4 816 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 SH3RF3Q8TEJ3 882 aaPredicted RBP5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 ZNF428Q96B54 188 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 ZNF669Q96BR6 464 aaPredicted RBP5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 CDC6Q99741 560 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 SPATA9Q9BWV2 254 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 KLC2Q9H0B6 622 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 IPPKQ9H8X2 491 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 ZFP69BQ9UJL9 534 aa5.47□□□□□ -1.53
PRPF40A-207ENST00000471701 MATN3O15232 486 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 GPR42O15529 346 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 KLHL18O94889 574 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 FSHBP01225 129 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 EPHA5P54756 1037 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 DPP8Q6V1X1 898 aaPredicted RBP5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 STPG3Q8N7X2 389 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 TSC22D4Q9Y3Q8 395 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 TCAF1Q9Y4C2 921 aa5.46□□□□□ -1.54
PRPF40A-207ENST00000471701 H0Y858 1186 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 AQP7O14520 342 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 ZNF623O75123 536 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 KNG1P01042 644 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 APPP05067 770 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 COL6A1P12109 1028 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 PAK1Q13153 545 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 HS1BP3Q53T59 392 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 HABP4Q5JVS0 413 aaKnown RBP5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 YOD1Q5VVQ6 348 aaPredicted RBP5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 BTBD8Q5XKL5 378 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 CD276Q5ZPR3 534 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 ZNF585AQ6P3V2 769 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 IFNL2Q8IZJ0 200 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 AJUBAQ96IF1 538 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 PTPN18Q99952 460 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 SEMA4AQ9H3S1 761 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 SEC61A2Q9H9S3 476 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 CATSPERZQ9NTU4 200 aa5.45□□□□□ -1.54
PRPF40A-207ENST00000471701 ZNF839A8K0R7 811 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 GSTA4O15217 222 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 PDPK1O15530 556 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 NAT1P18440 290 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 ZNF568Q3ZCX4 644 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 SPRED1Q7Z699 444 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 MTDHQ86UE4 582 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 PTPRN2Q92932 1015 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 TACO1Q9BSH4 297 aaKnown RBP5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 KCND1Q9NSA2 647 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 RIC8BQ9NVN3 520 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 SRRDQ9UH36 339 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 TRAF6Q9Y4K3 522 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 TELO2Q9Y4R8 837 aa5.44□□□□□ -1.54
PRPF40A-207ENST00000471701 ASXL2Q76L83 1435 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 E9PSI1 815 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 ACOT7O00154 380 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 AKAP8O43823 692 aaKnown RBP5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 GDF5P43026 501 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 ST5P78524 1137 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 GPR19Q15760 415 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 MTERF2Q49AM1 385 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 ARHGAP36Q6ZRI8 547 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 MAMDC2Q7Z304 686 aaPredicted RBP5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 GIMAP8Q8ND71 665 aaPredicted RBP5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 DNERQ8NFT8 737 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 FBXW5Q969U6 566 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 LMF1Q96S06 567 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 CARD11Q9BXL7 1154 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 CD244Q9BZW8 370 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 CD248Q9HCU0 757 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 ARHGAP28Q9P2N2 729 aa5.43□□□□□ -1.54
PRPF40A-207ENST00000471701 TRBV23-1A0A0A0MS06 115 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms