RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CHMP4BQ9H444 224 aaKnown RBP8□□□□□ -1.13
HDAC1-204ENST00000471488 BCAS3Q9H6U6 928 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 RTEL1Q9NZ71 1219 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 ZBTB47Q9UFB7 747 aaPredicted RBP8□□□□□ -1.13
HDAC1-204ENST00000471488 ZNF215Q9UL58 517 aaPredicted RBP8□□□□□ -1.13
HDAC1-204ENST00000471488 ZDBF2Q9HCK1 2354 aa8□□□□□ -1.13
HDAC1-204ENST00000471488 ATG2AQ2TAZ0 1938 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 KIAA1217Q5T5P2 1943 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 STK25O00506 426 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 ENPP3O14638 875 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 EYA4O95677 639 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 GLP2RO95838 553 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 CHRNA1P02708 482 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 SRGAP2BP0DMP2 458 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 CCND2P30279 289 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 CD52P31358 61 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 ICAM3P32942 547 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 GATMP50440 423 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 SP2Q02086 613 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 TMEM62Q0P6H9 643 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 COASYQ13057 564 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 CAMK1Q14012 370 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 CBX2Q14781 532 aaPredicted RBP7.99□□□□□ -1.13
HDAC1-204ENST00000471488 PLPP4Q5VZY2 271 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 KCNV1Q6PIU1 500 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 RUFY4Q6ZNE9 571 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 ERMP1Q7Z2K6 904 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 RSPH3Q86UC2 560 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 HOMER1Q86YM7 354 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 THNSL1Q8IYQ7 743 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 KREMEN2Q8NCW0 462 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 PNMA1Q8ND90 353 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 FLCNQ8NFG4 579 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 IL31RAQ8NI17 732 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 SPPL3Q8TCT6 385 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 PIBF1Q8WXW3 757 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 PLVAPQ9BX97 442 aa7.99□□□□□ -1.13
HDAC1-204ENST00000471488 M0QZ92 97 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 FOXP2O15409 715 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 CAND2O75155 1236 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 FGAP02671 866 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 PARP1P09874 1014 aaKnown RBP7.98□□□□□ -1.13
HDAC1-204ENST00000471488 RFX1P22670 979 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 APOBRQ0VD83 1088 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 MTMR3Q13615 1198 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 LPIN1Q14693 890 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 PGM5Q15124 567 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 TMEM105Q8N8V8 129 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 OTUD7AQ8TE49 926 aaPredicted RBP7.98□□□□□ -1.13
HDAC1-204ENST00000471488 LMBR1Q8WVP7 490 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 DNAJB3Q8WWF6 145 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 ESR2Q92731 530 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 CLP1Q92989 425 aaKnown RBP7.98□□□□□ -1.13
HDAC1-204ENST00000471488 ZBTB10Q96DT7 871 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 PDCD2LQ9BRP1 358 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 AMNQ9BXJ7 453 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 USP26Q9BXU7 913 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 SMOC2Q9H3U7 446 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 ENTPD7Q9NQZ7 604 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 TMEM260Q9NX78 707 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 PKD2L1Q9P0L9 805 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 CDH22Q9UJ99 828 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 ANAPC4Q9UJX5 808 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 GINS2Q9Y248 185 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 PCDHB12Q9Y5F1 795 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 CDY2AQ9Y6F7 541 aa7.98□□□□□ -1.13
HDAC1-204ENST00000471488 MED19A0JLT2 244 aaPredicted RBP7.97□□□□□ -1.13
HDAC1-204ENST00000471488 SPDYE4A6NLX3 237 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 TBKBP1A7MCY6 615 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 CCER2I3L3R5 266 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 DGKIO75912 1065 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 ASGR2P07307 311 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 LINC00271P0C7V0 271 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 STAG3L1P0CL83 205 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 NFX1Q12986 1120 aaKnown RBP7.97□□□□□ -1.13
HDAC1-204ENST00000471488 PPFIA1Q13136 1202 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 GNPTABQ3T906 1256 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 ASPRV1Q53RT3 343 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 DGLUCYQ7Z3D6 616 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 IQCA1Q86XH1 822 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 KIAA2013Q8IYS2 634 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 CMTR2Q8IYT2 770 aaKnown RBP7.97□□□□□ -1.13
HDAC1-204ENST00000471488 TMEM87AQ8NBN3 555 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 GLG1Q92896 1179 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 P2RX5Q93086 422 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 FAM227BQ96M60 508 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 TTC14Q96N46 770 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 JMJD4Q9H9V9 463 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 TCP11L1Q9NUJ3 509 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 NR2E1Q9Y466 385 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 PCDHA1Q9Y5I3 950 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 CACNA1AO00555 2505 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 NEDD4P46934 1319 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 TTC41PQ6P2S7 1318 aa7.97□□□□□ -1.13
HDAC1-204ENST00000471488 MYO15AQ9UKN7 3530 aa7.96□□□□□ -1.13
HDAC1-204ENST00000471488 PLXNA3P51805 1871 aa7.96□□□□□ -1.13
HDAC1-204ENST00000471488 GCOM1H8Y6P7 765 aaPredicted RBP7.96□□□□□ -1.14
HDAC1-204ENST00000471488 KRT37O76014 449 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 BRD1O95696 1058 aa7.96□□□□□ -1.14
HDAC1-204ENST00000471488 WEE2P0C1S8 567 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms