RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 TREHO43280 583 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 SORBS3O60504 671 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 KCNA2P16389 499 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 TCF7P36402 384 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-204ENST00000469504 ERVK-21P61565 698 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 ADAM17P78536 824 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 HIC1Q14526 733 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 RSPH3Q86UC2 560 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 MICALL1Q8N3F8 863 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 DBF4BQ8NFT6 615 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 TET1Q8NFU7 2136 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 ZFP91Q96JP5 570 aaPredicted RBP12.57□□□□□ -0.4
COL4A3-204ENST00000469504 SMARCAD1Q9H4L7 1026 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 JADE2Q9NQC1 790 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 PCDHA6Q9UN73 950 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 PCDHA8Q9Y5H6 950 aa12.57□□□□□ -0.4
COL4A3-204ENST00000469504 TRIP12Q14669 1992 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 CCDC196A0A1B0GTZ2 297 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 ZBTB43O43298 467 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 CDC45O75419 566 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 ITGB5P18084 799 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 RXRAP19793 462 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 HTRA4P83105 476 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 ARHGAP4P98171 946 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 EXOSC10Q01780 885 aaKnown RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 GRB10Q13322 594 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 SKIV2LQ15477 1246 aaKnown RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 RTN1Q16799 776 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 UTP14CQ5TAP6 766 aaKnown RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 MCTP2Q6DN12 878 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 HEATR3Q7Z4Q2 680 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 CMTR1Q8N1G2 835 aaKnown RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 ADAMTS19Q8TE59 1207 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 LMBR1Q8WVP7 490 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 UHRF1Q96T88 793 aaPredicted RBP12.56□□□□□ -0.4
COL4A3-204ENST00000469504 RIC8AQ9NPQ8 531 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 SETD4Q9NVD3 440 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 MYH7BA7E2Y1 1941 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 NFASCO94856 1347 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 CNTNAP5Q8WYK1 1306 aa12.56□□□□□ -0.4
COL4A3-204ENST00000469504 COL4A6Q14031 1691 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 LINC01553A4QN01 128 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 RRN3P2A6NIE6 340 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 SLC26A2P50443 739 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 NAPAP54920 295 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 PPFIA1Q13136 1202 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 MYOCDQ8IZQ8 938 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 TOP1MTQ969P6 601 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 LRRC2Q9BYS8 371 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 BCAS3Q9H6U6 928 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 CERS4Q9HA82 394 aa12.55□□□□□ -0.4
COL4A3-204ENST00000469504 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
COL4A3-204ENST00000469504 LCHNA4D1U4 455 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 MBLAC1A4D2B0 266 aaPredicted RBP12.54□□□□□ -0.4
COL4A3-204ENST00000469504 RFXAPO00287 272 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 LPXNO60711 386 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 ATP9AO75110 1047 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 ARHGEF15O94989 841 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 ADCY7P51828 1080 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 SP4Q02446 784 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 UBE2SQ16763 222 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 PTPROQ16827 1216 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 TCTN1Q2MV58 587 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 WWC2Q6AWC2 1192 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 TRIM50Q86XT4 487 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 FBXL16Q8N461 479 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 CCDC12Q8WUD4 166 aaPredicted RBP12.54□□□□□ -0.4
COL4A3-204ENST00000469504 GLG1Q92896 1179 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 HLA-CQ95604 372 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 SDF4Q9BRK5 362 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 IFIH1Q9BYX4 1025 aaKnown RBP12.54□□□□□ -0.4
COL4A3-204ENST00000469504 KCNH7Q9NS40 1196 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 BARHL2Q9NY43 387 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 SLC9A2Q9UBY0 812 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 TUBE1Q9UJT0 475 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 SQORQ9Y6N5 450 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 TRANK1O15050 2925 aa12.54□□□□□ -0.4
COL4A3-204ENST00000469504 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 GSTTP1A0A1W2PQM5 241 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 GOLGA8AA7E2F4 631 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 GOLGA8BA8MQT2 603 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 EPB41L2O43491 1005 aaKnown RBP12.53□□□□□ -0.4
COL4A3-204ENST00000469504 CTSHP09668 335 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 BMP1P13497 986 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 SREBF1P36956 1147 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 FGD1P98174 961 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 FUT2Q10981 343 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 GRIK4Q16099 956 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 CEP55Q53EZ4 464 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL4A3-204ENST00000469504 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 KCNB2Q92953 911 aa12.53□□□□□ -0.4
COL4A3-204ENST00000469504 YME1L1Q96TA2 773 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms