RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DEFB123Q8N688 67 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 PGBD1Q96JS3 809 aa16.49■□□□□ 0.23
COL27A1-203ENST00000468565 MTIF3Q9H2K0 278 aaKnown RBP16.49■□□□□ 0.23
COL27A1-203ENST00000468565 PTK7Q13308 1070 aa16.48■□□□□ 0.23
COL27A1-203ENST00000468565 CEP55Q53EZ4 464 aa16.48■□□□□ 0.23
COL27A1-203ENST00000468565 REXO1Q8N1G1 1221 aaKnown RBP16.48■□□□□ 0.23
COL27A1-203ENST00000468565 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
COL27A1-203ENST00000468565 TNPO1Q92973 898 aaKnown RBP16.48■□□□□ 0.23
COL27A1-203ENST00000468565 SH3GLB2Q9NR46 395 aa16.48■□□□□ 0.23
COL27A1-203ENST00000468565 ZNF215Q9UL58 517 aaPredicted RBP16.48■□□□□ 0.23
COL27A1-203ENST00000468565 WDR81Q562E7 1941 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 CPLX1O14810 134 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 IQCF3P0C7M6 154 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 HOXC8P31273 242 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 ARHGAP4P98171 946 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
COL27A1-203ENST00000468565 JAKMIP3Q5VZ66 844 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 CPLX2Q6PUV4 134 aaKnown RBP16.47■□□□□ 0.23
COL27A1-203ENST00000468565 NIPA1Q7RTP0 329 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 CRYGNQ8WXF5 182 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 VWCEQ96DN2 955 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 KCNH7Q9NS40 1196 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 NFASCO94856 1347 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 MEIS1O00470 390 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 ZNF697Q5TEC3 545 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 DHX38Q92620 1227 aaKnown RBP16.47■□□□□ 0.23
COL27A1-203ENST00000468565 TELO2Q9Y4R8 837 aa16.47■□□□□ 0.23
COL27A1-203ENST00000468565 TMEM265A0A087WTH1 108 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 DEXIO95424 95 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 PARNO95453 639 aaKnown RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 CYP3A4P08684 503 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 TCF7P36402 384 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 SP4Q02446 784 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 ANKRD1Q15327 319 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 Q7L0L9 218 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 FAM177A1Q8N128 213 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 IL27Q8NEV9 243 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 CYP2W1Q8TAV3 490 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 SEPT1Q8WYJ6 367 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 LARP6Q9BRS8 491 aaKnown RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 JPH1Q9HDC5 661 aaPredicted RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 MTMR10Q9NXD2 777 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 VPS54Q9P1Q0 977 aa16.46■□□□□ 0.23
COL27A1-203ENST00000468565 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.23
COL27A1-203ENST00000468565 GSTTP1A0A1W2PQM5 241 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 TRAK2O60296 914 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 PPFIA3O75145 1194 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SELPP16109 830 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 MCM2P49736 904 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 STK3Q13188 491 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 HIC1Q14526 733 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 UTP14CQ5TAP6 766 aaKnown RBP16.45■□□□□ 0.22
COL27A1-203ENST00000468565 PKD2L1Q9P0L9 805 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 ARP10275 920 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 CKBP12277 381 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 ZNF76P36508 570 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
COL27A1-203ENST00000468565 LRRC8DQ7L1W4 858 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 OTOP2Q7RTS6 562 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 DEFB128Q7Z7B8 93 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SDF4Q9BRK5 362 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 AGO4Q9HCK5 861 aaKnown RBP16.45■□□□□ 0.22
COL27A1-203ENST00000468565 CXXC1Q9P0U4 656 aaPredicted RBP16.45■□□□□ 0.22
COL27A1-203ENST00000468565 SLC9A2Q9UBY0 812 aa16.45■□□□□ 0.22
COL27A1-203ENST00000468565 PTPRSQ13332 1948 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 PFKFB2O60825 505 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 CDKL5O76039 1030 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 GNAT1P11488 350 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 ACTN1P12814 892 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 AK2P54819 239 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 NUCB2P80303 420 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 ZNF200P98182 395 aaPredicted RBP16.44■□□□□ 0.22
COL27A1-203ENST00000468565 SCRN1Q12765 414 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 RNPEPQ9H4A4 650 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 TPCN1Q9ULQ1 816 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 EMSYQ7Z589 1322 aa16.44■□□□□ 0.22
COL27A1-203ENST00000468565 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 NLRP5P59047 1200 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 SETQ01105 290 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-203ENST00000468565 L1TD1Q5T7N2 865 aaKnown RBP16.43■□□□□ 0.22
COL27A1-203ENST00000468565 ATP6V0A1Q93050 837 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 SMARCAD1Q9H4L7 1026 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 ERAP1Q9NZ08 941 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 STK36Q9NRP7 1315 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 IGLV3-22A0A075B6J6 115 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 LGR5O75473 907 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 DNAJB2P25686 324 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 ITGB3BPQ13352 177 aaPredicted RBP16.43■□□□□ 0.22
COL27A1-203ENST00000468565 PLA2G4DQ86XP0 818 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 WNT8BQ93098 351 aa16.43■□□□□ 0.22
COL27A1-203ENST00000468565 NRCAMQ92823 1304 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms