RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 CCL14Q16627 93 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 TMEM63BQ5T3F8 832 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 HAUS3Q68CZ6 603 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 POTEGQ6S5H5 508 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 MIER3Q7Z3K6 550 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 CATSPER3Q86XQ3 398 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 CEP57L1Q8IYX8 460 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 ERMNQ8TAM6 284 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 DYDC2Q96IM9 177 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 CDK5RAP3Q96JB5 506 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 PYM1Q9BRP8 204 aaKnown RBP12.06□□□□□ -0.48
MSX1-202ENST00000468421 TINF2Q9BSI4 451 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 FUCA2Q9BTY2 467 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 POLR3CQ9BUI4 534 aaPredicted RBP12.06□□□□□ -0.48
MSX1-202ENST00000468421 PDGFCQ9NRA1 345 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 WRAP73Q9P2S5 460 aaPredicted RBP12.06□□□□□ -0.48
MSX1-202ENST00000468421 GABRQQ9UN88 632 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 SYNGAP1Q96PV0 1343 aa12.06□□□□□ -0.48
MSX1-202ENST00000468421 A0A087WWV3 80 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 E9PMD0 336 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SLC26A4O43511 780 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 LETM1O95202 739 aaPredicted RBP12.05□□□□□ -0.48
MSX1-202ENST00000468421 PTGS1P23219 599 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 RGS2P41220 211 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 KRT76Q01546 638 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SP4Q02446 784 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SP3Q02447 781 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
MSX1-202ENST00000468421 POSTNQ15063 836 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 ZNF746Q6NUN9 644 aaPredicted RBP12.05□□□□□ -0.48
MSX1-202ENST00000468421 TAPT1Q6NXT6 567 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 CCDC62Q6P9F0 684 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 CYFIP1Q7L576 1253 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 ELOA2Q8IYF1 753 aaPredicted RBP12.05□□□□□ -0.48
MSX1-202ENST00000468421 BANK1Q8NDB2 785 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SOCS4Q8WXH5 440 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 APBA2Q99767 749 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 HSD17B14Q9BPX1 270 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SENP7Q9BQF6 1050 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 ANP32EQ9BTT0 268 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 TUFT1Q9NNX1 390 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 VTA1Q9NP79 307 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SLC5A4Q9NY91 659 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 STK17AQ9UEE5 414 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 DDX41Q9UJV9 622 aaKnown RBP12.05□□□□□ -0.48
MSX1-202ENST00000468421 KIAA1024Q9UPX6 916 aa12.05□□□□□ -0.48
MSX1-202ENST00000468421 RBM47A0AV96 593 aaKnown RBP12.04□□□□□ -0.48
MSX1-202ENST00000468421 WDR64B1ANS9 1081 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 FARP2O94887 1054 aaPredicted RBP12.04□□□□□ -0.48
MSX1-202ENST00000468421 SLITRK3O94933 977 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 GGPS1O95749 300 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 IGHA2P01877 340 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 PSMC6P62333 389 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 MCM6Q14566 821 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 UGCGQ16739 394 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 LRSAM1Q6UWE0 723 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 CD99L2Q8TCZ2 262 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 LARP4BQ92615 738 aaKnown RBP12.04□□□□□ -0.48
MSX1-202ENST00000468421 RAD54LQ92698 747 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 COPS5Q92905 334 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 LXNQ9BS40 222 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 NT5C3AQ9H0P0 336 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 CUEDC2Q9H467 287 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 JPH1Q9HDC5 661 aaPredicted RBP12.04□□□□□ -0.48
MSX1-202ENST00000468421 KBTBD4Q9NVX7 518 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 KIAA1468Q9P260 1216 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 STK24Q9Y6E0 443 aa12.04□□□□□ -0.48
MSX1-202ENST00000468421 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 GPR25O00155 361 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 ZBTB39O15060 712 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 GTPBP6O43824 516 aaPredicted RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 P4HBP07237 508 aaKnown RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 TGFB3P10600 412 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 SFNP31947 248 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 ADCYAP1R1P41586 468 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 JAK3P52333 1124 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 ACTR2P61160 394 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 PRKCZQ05513 592 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 DPYDQ12882 1025 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 CUL4BQ13620 913 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 NEDD9Q14511 834 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 DHX8Q14562 1220 aaKnown RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 TTLL4Q14679 1199 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 OLFML2BQ68BL8 750 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 KANK3Q6NY19 840 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 KCNV1Q6PIU1 500 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 GAS2L3Q86XJ1 694 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 TPH2Q8IWU9 490 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 MSL3Q8N5Y2 521 aaKnown RBP12.03□□□□□ -0.48
MSX1-202ENST00000468421 RDM1Q8NG50 284 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 NEK9Q8TD19 979 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 SCFD2Q8WU76 684 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 BLZF1Q9H2G9 400 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 MAGEF1Q9HAY2 307 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 TCEAL9Q9UHQ7 104 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 TUBE1Q9UJT0 475 aa12.03□□□□□ -0.48
MSX1-202ENST00000468421 SAMM50Q9Y512 469 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms