RNA–Protein interactions for RNA: ENST00000468179.6

COMMD3-206, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 1,344 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-206ENST00000468179 DEFB128Q7Z7B8 93 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 PGBD1Q96JS3 809 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 SMARCAD1Q9H4L7 1026 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 BCAS3Q9H6U6 928 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 JPH1Q9HDC5 661 aaPredicted RBP16.65■□□□□ 0.26
COMMD3-206ENST00000468179 MTMR10Q9NXD2 777 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 SLC9A2Q9UBY0 812 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 SLC4A7Q9Y6M7 1214 aa16.65■□□□□ 0.26
COMMD3-206ENST00000468179 DNAH12Q6ZR08 3092 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 XBP1P17861 261 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 STK3Q13188 491 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 RAB30Q15771 203 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 GALNT17Q6IS24 598 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 GLG1Q92896 1179 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 ERAP1Q9NZ08 941 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 PKD2L1Q9P0L9 805 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 MSRAQ9UJ68 235 aa16.64■□□□□ 0.25
COMMD3-206ENST00000468179 NRCAMQ92823 1304 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 ZBBXA8MT70 800 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 CAND2O75155 1236 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 CKBP12277 381 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 SETQ01105 290 aaPredicted RBP16.63■□□□□ 0.25
COMMD3-206ENST00000468179 Q7L0L9 218 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 SERINC5Q86VE9 423 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 PLA2G4DQ86XP0 818 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 IL17RAQ96F46 866 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 CTAGE1Q96RT6 745 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 RNPEPQ9H4A4 650 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
COMMD3-206ENST00000468179 VPS54Q9P1Q0 977 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 TCEAL9Q9UHQ7 104 aa16.63■□□□□ 0.25
COMMD3-206ENST00000468179 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
COMMD3-206ENST00000468179 GSTTP1A0A1W2PQM5 241 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 BAIAP3O94812 1187 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 ARP10275 920 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 DNAJB2P25686 324 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 HOXC8P31273 242 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 CYP2W1Q8TAV3 490 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 DHX38Q92620 1227 aaKnown RBP16.62■□□□□ 0.25
COMMD3-206ENST00000468179 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
COMMD3-206ENST00000468179 SEMA6BQ9H3T3 888 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 STXBP5LQ9Y2K9 1186 aa16.62■□□□□ 0.25
COMMD3-206ENST00000468179 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 MYH7BA7E2Y1 1941 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 PFKFB2O60825 505 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 EFCAB14O75071 495 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 PPFIA3O75145 1194 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 GABBR2O75899 941 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 RPLP2P05387 115 aaKnown RBP16.61■□□□□ 0.25
COMMD3-206ENST00000468179 THPOP40225 353 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 USP11P51784 963 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 ZNF200P98182 395 aaPredicted RBP16.61■□□□□ 0.25
COMMD3-206ENST00000468179 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 PHOSPHO2Q8TCD6 241 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 CRYGNQ8WXF5 182 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 WASF1Q92558 559 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 TIFAQ96CG3 184 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 TBC1D22BQ9NU19 505 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 SETD4Q9NVD3 440 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
COMMD3-206ENST00000468179 RRN3P2A6NIE6 340 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 RSPH10B2B2RC85 870 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 RSPH10BP0C881 870 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 ATP2A2P16615 1042 aaKnown RBP16.6■□□□□ 0.25
COMMD3-206ENST00000468179 CIITAP33076 1130 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 SLC26A2P50443 739 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 ACTR2P61160 394 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 SCRN1Q12765 414 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 TRIM71Q2Q1W2 868 aaKnown RBP16.6■□□□□ 0.25
COMMD3-206ENST00000468179 TAF2Q6P1X5 1199 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 PLPPR4Q7Z2D5 763 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 RSPH3Q86UC2 560 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 SLC9A7Q96T83 725 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 ZNF577Q9BSK1 485 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 CXXC1Q9P0U4 656 aaPredicted RBP16.6■□□□□ 0.25
COMMD3-206ENST00000468179 TPCN1Q9ULQ1 816 aa16.6■□□□□ 0.25
COMMD3-206ENST00000468179 FAM86B1E9PN63 330 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 IPO5O00410 1097 aaKnown RBP16.59■□□□□ 0.25
COMMD3-206ENST00000468179 TREHO43280 583 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 LGR5O75473 907 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 CXCL10P02778 98 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 FAM86B2P0C5J1 330 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 KCNJ6P48051 423 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 STAT5BP51692 787 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 NEK4P51957 841 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 AK2P54819 239 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 PPFIA1Q13136 1202 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 ZNF618Q5T7W0 954 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 FAM160B1Q5W0V3 765 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 MIS18BP1Q6P0N0 1132 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 CNKSR3Q6P9H4 555 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 DAGLBQ8NCG7 672 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 FAM161BQ96MY7 647 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 PBX4Q9BYU1 374 aa16.59■□□□□ 0.25
COMMD3-206ENST00000468179 STK36Q9NRP7 1315 aa16.58■□□□□ 0.25
COMMD3-206ENST00000468179 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
COMMD3-206ENST00000468179 KIF28PB7ZC32 967 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms