RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 LIFRP42702 1097 aa24.21■■□□□ 1.47
COL9A3-207ENST00000467819 MKRN4PQ13434 485 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-207ENST00000467819 LMBR1Q8WVP7 490 aa24.21■■□□□ 1.47
COL9A3-207ENST00000467819 SEPT8Q92599 483 aa24.21■■□□□ 1.47
COL9A3-207ENST00000467819 INSL6Q9Y581 213 aa24.21■■□□□ 1.47
COL9A3-207ENST00000467819 CAND2O75155 1236 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 TCF7P36402 384 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-207ENST00000467819 NECTIN1Q15223 517 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 MICU3Q86XE3 530 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 GIMAP8Q8ND71 665 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-207ENST00000467819 HLA-CQ95604 372 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 GPRASP2Q96D09 838 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 PKD2L1Q9P0L9 805 aa24.2■■□□□ 1.46
COL9A3-207ENST00000467819 ATP9AO75110 1047 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 KCNA2P16389 499 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 TMTC3Q6ZXV5 915 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 HEATR3Q7Z4Q2 680 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 FANCBQ8NB91 859 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 C17orf80Q9BSJ5 609 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 LMCD1Q9NZU5 365 aa24.19■■□□□ 1.46
COL9A3-207ENST00000467819 SPDYE3A6NKU9 549 aa24.18■■□□□ 1.46
COL9A3-207ENST00000467819 ITGB5P18084 799 aa24.18■■□□□ 1.46
COL9A3-207ENST00000467819 ADAM17P78536 824 aa24.18■■□□□ 1.46
COL9A3-207ENST00000467819 FBXO22Q8NEZ5 403 aa24.18■■□□□ 1.46
COL9A3-207ENST00000467819 CDHR1Q96JP9 859 aa24.18■■□□□ 1.46
COL9A3-207ENST00000467819 NRCAMQ92823 1304 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 UPP2O95045 317 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 MARK3P27448 753 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 HTRA4P83105 476 aaPredicted RBP24.17■■□□□ 1.46
COL9A3-207ENST00000467819 MTMR1Q13613 665 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 SKAP1Q86WV1 359 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 PCDHA6Q9UN73 950 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 PCDHA8Q9Y5H6 950 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 LOXHD1Q8IVV2 1947 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 RALGAPA2Q2PPJ7 1873 aa24.17■■□□□ 1.46
COL9A3-207ENST00000467819 SYNE3Q6ZMZ3 975 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 RUFY4Q6ZNE9 571 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 SGMS1Q86VZ5 419 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 SP7Q8TDD2 431 aaPredicted RBP24.16■■□□□ 1.46
COL9A3-207ENST00000467819 SEPT1Q8WYJ6 367 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 YME1L1Q96TA2 773 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 UBIAD1Q9Y5Z9 338 aa24.16■■□□□ 1.46
COL9A3-207ENST00000467819 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.15■■□□□ 1.46
COL9A3-207ENST00000467819 GSTTP1A0A1W2PQM5 241 aa24.15■■□□□ 1.46
COL9A3-207ENST00000467819 PPFIA1Q13136 1202 aa24.15■■□□□ 1.46
COL9A3-207ENST00000467819 FAM26DQ5JW98 314 aa24.15■■□□□ 1.46
COL9A3-207ENST00000467819 IFIH1Q9BYX4 1025 aaKnown RBP24.15■■□□□ 1.46
COL9A3-207ENST00000467819 CNTNAP5Q8WYK1 1306 aa24.14■■□□□ 1.46
COL9A3-207ENST00000467819 COL9A1P20849 921 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 RNF20Q5VTR2 975 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 WWC2Q6AWC2 1192 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 APOA5Q6Q788 366 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 APBB2Q92870 758 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 GLG1Q92896 1179 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 TOP1MTQ969P6 601 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 TCEANC2Q96MN5 208 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 EHMT1Q9H9B1 1298 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 JADE2Q9NQC1 790 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 ERAP1Q9NZ08 941 aa24.14■■□□□ 1.45
COL9A3-207ENST00000467819 CHRNA1P02708 482 aa24.13■■□□□ 1.45
COL9A3-207ENST00000467819 GHRP10912 638 aa24.13■■□□□ 1.45
COL9A3-207ENST00000467819 GRIK4Q16099 956 aa24.13■■□□□ 1.45
COL9A3-207ENST00000467819 TUBE1Q9UJT0 475 aa24.13■■□□□ 1.45
COL9A3-207ENST00000467819 ATG2AQ2TAZ0 1938 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 COL4A6Q14031 1691 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 NAPAP54920 295 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 EPC2Q52LR7 807 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 BMP2KLQ5H9B9 411 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 TAF2Q6P1X5 1199 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 PGBD1Q96JS3 809 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 NEK1Q96PY6 1258 aa24.12■■□□□ 1.45
COL9A3-207ENST00000467819 RBM28Q9NW13 759 aaKnown RBP24.12■■□□□ 1.45
COL9A3-207ENST00000467819 MYO7AQ13402 2215 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 IGBP1P78318 339 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 RTN1Q16799 776 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 TYW1BQ6NUM6 668 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 RSPH3Q86UC2 560 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 DNAJB3Q8WWF6 145 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 SAMD11Q96NU1 681 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 SMARCAD1Q9H4L7 1026 aa24.11■■□□□ 1.45
COL9A3-207ENST00000467819 UBE2ZQ9H832 354 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-207ENST00000467819 JPH1Q9HDC5 661 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-207ENST00000467819 ZBTB43O43298 467 aa24.1■■□□□ 1.45
COL9A3-207ENST00000467819 MGAT3Q09327 533 aa24.1■■□□□ 1.45
COL9A3-207ENST00000467819 RPAINQ86UA6 219 aa24.1■■□□□ 1.45
COL9A3-207ENST00000467819 BRPF3Q9ULD4 1205 aa24.1■■□□□ 1.45
COL9A3-207ENST00000467819 MAFGO15525 162 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 LPIN1Q14693 890 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 MARCH8Q5T0T0 291 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 CYP2W1Q8TAV3 490 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 ZBTB10Q96DT7 871 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 MRPL38Q96DV4 380 aaKnown RBP24.09■■□□□ 1.45
COL9A3-207ENST00000467819 MXRA8Q9BRK3 442 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 RIC8AQ9NPQ8 531 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 KCNH7Q9NS40 1196 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 SLC9A2Q9UBY0 812 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 RAPGEFL1Q9UHV5 662 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 TTC3P53804 2025 aa24.09■■□□□ 1.45
COL9A3-207ENST00000467819 MBLAC1A4D2B0 266 aaPredicted RBP24.08■■□□□ 1.45
COL9A3-207ENST00000467819 ADCY7P51828 1080 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms