RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 DDX41Q9UJV9 622 aaKnown RBP7.72□□□□□ -1.17
SCAF4-204ENST00000467731 A0A1W2PQ27 194 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 A0A1W2PQ64 194 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 A0A1W2PQD8 194 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 MYCNP04198 464 aaPredicted RBP7.71□□□□□ -1.17
SCAF4-204ENST00000467731 TXNP10599 105 aaKnown RBP7.71□□□□□ -1.17
SCAF4-204ENST00000467731 SP4Q02446 784 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 SLC20A2Q08357 652 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 TRIM32Q13049 653 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 CCDC144BQ3MJ40 725 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 GJC2Q5T442 439 aaPredicted RBP7.71□□□□□ -1.17
SCAF4-204ENST00000467731 NCAPH2Q6IBW4 605 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 KCNV1Q6PIU1 500 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 B3GNT9Q6UX72 402 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 AK8Q96MA6 479 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 UNC45AQ9H3U1 944 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 GOLPH3LQ9H4A5 285 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 JPH1Q9HDC5 661 aaPredicted RBP7.71□□□□□ -1.17
SCAF4-204ENST00000467731 LRWD1Q9UFC0 647 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 NFASCO94856 1347 aa7.71□□□□□ -1.17
SCAF4-204ENST00000467731 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 EML1O00423 815 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 ADCY6O43306 1168 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 ADCY3O60266 1144 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 FARP2O94887 1054 aaPredicted RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 GGPS1O95749 300 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 ZNF865P0CJ78 1059 aaPredicted RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 HSPA1AP0DMV8 641 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 HSPA1BP0DMV9 641 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 CMA1P23946 247 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 NEDD9Q14511 834 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 MFSD14CQ5VZR4 134 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 FSIP1Q8NA03 581 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 MRPS27Q92552 414 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 COPS5Q92905 334 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 SLC9A2Q9UBY0 812 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 TELO2Q9Y4R8 837 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 CCNE2O96020 404 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 HSPA8P11142 646 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 PFKFB1P16118 471 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 UBA7P41226 1012 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 NDUFA8P51970 172 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 TRMT44Q8IYL2 757 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 GPT2Q8TD30 523 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 MMTAG2Q9BU76 263 aaKnown RBP7.71□□□□□ -1.18
SCAF4-204ENST00000467731 SAMM50Q9Y512 469 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 PTCH2Q9Y6C5 1203 aa7.71□□□□□ -1.18
SCAF4-204ENST00000467731 NR1I2O75469 434 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 HMGCRP04035 888 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 CYBAP13498 195 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 ZSCAN20P17040 1043 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 SMPD1P17405 629 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 LIG1P18858 919 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 LBX1P52954 281 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 TERF1P54274 439 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 PRMT2P55345 433 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 KRT76Q01546 638 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 CACNB2Q08289 660 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 MAPK8IP2Q13387 824 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 ZRSR1Q15695 479 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 HSDL1Q3SXM5 330 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 DUSP28Q4G0W2 176 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 CELF3Q5SZQ8 465 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 METTL7BQ6UX53 244 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 PDILTQ8N807 584 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 GIMAP8Q8ND71 665 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 TRPV1Q8NER1 839 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 PXYLP1Q8TE99 480 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 LENG1Q96BZ8 264 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 PANK2Q9BZ23 570 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 MLXIPQ9HAP2 919 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 TCEAL9Q9UHQ7 104 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 A0A087X0B3 334 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 PRKAR2AP13861 404 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 TXLNAP40222 546 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 CYP4A11Q02928 519 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 TNFAIP2Q03169 654 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 SNW1Q13573 536 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 KARSQ15046 597 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 KRT79Q5XKE5 535 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 IQSEC1Q6DN90 963 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 ZNF746Q6NUN9 644 aaPredicted RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 MIER3Q7Z3K6 550 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 CABP7Q86V35 215 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 EIF2AK1Q9BQI3 630 aaKnown RBP7.7□□□□□ -1.18
SCAF4-204ENST00000467731 DISC1Q9NRI5 854 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 FAM13BQ9NYF5 915 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 KCNH3Q9ULD8 1083 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 HPSEQ9Y251 543 aa7.7□□□□□ -1.18
SCAF4-204ENST00000467731 POTEB3A0JP26 581 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 WDR64B1ANS9 1081 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 POLR2DO15514 142 aaKnown RBP7.69□□□□□ -1.18
SCAF4-204ENST00000467731 GRK4P32298 578 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 ACTR2P61160 394 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 ECM1Q16610 540 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 HAUS3Q68CZ6 603 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 POTEBQ6S5H4 581 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 CCDC73Q6ZRK6 1079 aa7.69□□□□□ -1.18
SCAF4-204ENST00000467731 CATSPER3Q86XQ3 398 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms