RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	HSD17B14	Q9BPX1	270 aa		13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	TBC1D22B	Q9NU19	505 aa		13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	TCEAL9	Q9UHQ7	104 aa		13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	PNMA3	Q9UL41	463 aa		13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	PLXNA1	Q9UIW2	1896 aa		13.71	□□□□□ -0.21
HDLBP-231	ENST00000467435	ZNFX1	Q9P2E3	1918 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	TRIM49B	A6NDI0	452 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	ESPN	B1AK53	854 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	DHX15	O43143	795 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	COBL	O75128	1261 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	STAM2	O75886	525 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	CELF2	O95319	508 aa	Known RBP	13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	SLC25A27	O95847	323 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	PTGS1	P23219	599 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	EHHADH	Q08426	723 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	PSMD2	Q13200	908 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	CDKAL1	Q5VV42	579 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	TPH2	Q8IWU9	490 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCDC65	Q8IXS2	484 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	C2orf69	Q8N8R5	385 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	DNER	Q8NFT8	737 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	INPP4A	Q96PE3	977 aa	Predicted RBP	13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	LXN	Q9BS40	222 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	BHMT2	Q9H2M3	363 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	SLC39A2	Q9NP94	309 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	NMRK2	Q9NPI5	230 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	PANK4	Q9NVE7	773 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZKSCAN5	Q9Y2L8	839 aa		13.7	□□□□□ -0.22
HDLBP-231	ENST00000467435	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	BICDL2	A1A5D9	508 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	SLITRK3	O94933	977 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CETP	P11597	493 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	ERCC3	P19447	782 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCNE1	P24864	410 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	MSN	P26038	577 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	ALDH5A1	P51649	535 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	GTF2A2	P52657	109 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	KRT76	Q01546	638 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CACNB1	Q02641	598 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	MKRN3	Q13064	507 aa	Known RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCDC144B	Q3MJ40	725 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	FAM26F	Q5R3K3	315 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCDC186	Q7Z3E2	898 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	BANK1	Q8NDB2	785 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZNF526	Q8TF50	670 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	P2RX5	Q93086	422 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	TRIM47	Q96LD4	638 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	TXNRD2	Q9NNW7	524 aa		13.69	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCL15-CCL14	A0A0B4J2E2	113 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	FRMD3	A2A2Y4	597 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	POTEB2	H3BUK9	544 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	ATP9A	O75110	1047 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	JAK3	P52333	1124 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	PMS1	P54277	932 aa	Known RBP	13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	CNTN2	Q02246	1040 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	SPAG1	Q07617	926 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	RAD51AP2	Q09MP3	1159 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	CCL15	Q16663	113 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	GNPTAB	Q3T906	1256 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	ARSH	Q5FYA8	562 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	TTI2	Q6NXR4	508 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	TMC6	Q7Z403	805 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	CDHR1	Q96JP9	859 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	NACC1	Q96RE7	527 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	IWS1	Q96ST2	819 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	REEP2	Q9BRK0	252 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	RUSC1	Q9BVN2	902 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	RBPJL	Q9UBG7	517 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	NRBP1	Q9UHY1	535 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	SLC45A1	Q9Y2W3	748 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	SAMM50	Q9Y512	469 aa		13.68	□□□□□ -0.22
HDLBP-231	ENST00000467435	ASTN1	O14525	1302 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	DCAF8L1	A6NGE4	600 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	WDR64	B1ANS9	1081 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	MAFG	O15525	162 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	TBCA	O75347	108 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	P4HB	P07237	508 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	SFN	P31947	248 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	GIT2	Q14161	759 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	STXBP2	Q15833	593 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	FILIP1	Q7Z7B0	1213 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	FAM43A	Q8N2R8	423 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	GUF1	Q8N442	669 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	ANKRD20A12P	Q8NF67	263 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	PIGO	Q8TEQ8	1089 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	NOC3L	Q8WTT2	800 aa	Known RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	MS4A4A	Q96JQ5	239 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZNF830	Q96NB3	372 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	CTAGE1	Q96RT6	745 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	KCNF1	Q9H3M0	494 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	ZHX3	Q9H4I2	956 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	THAP9	Q9H5L6	903 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	INTS13	Q9NVM9	706 aa		13.67	□□□□□ -0.22
HDLBP-231	ENST00000467435	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.67	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms