RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 LRRC47Q8N1G4 583 aaKnown RBP6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 DNERQ8NFT8 737 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 OSBP2Q969R2 916 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 KCNJ15Q99712 375 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 KLC2Q9H0B6 622 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 DSEQ9UL01 958 aa6.31□□□□□ -1.4
CHMP2B-202ENST00000466696 FAM47E-STBD1D6RA91 191 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 COL6A2P12110 1019 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 IFRD2Q12894 506 aaPredicted RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 NTRK3Q16288 839 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 SKIDA1Q1XH10 827 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 HABP4Q5JVS0 413 aaKnown RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 Q6ZUG5 572 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 RALYLQ86SE5 291 aaKnown RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 RBM12BQ8IXT5 1001 aaKnown RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 NUDT10Q8NFP7 164 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 SH3RF3Q8TEJ3 882 aaPredicted RBP6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 NUDT11Q96G61 164 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 DEF6Q9H4E7 631 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 ARHGAP20Q9P2F6 1191 aa6.3□□□□□ -1.4
CHMP2B-202ENST00000466696 AKAP8O43823 692 aaKnown RBP6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 KNG1P01042 644 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 LTFP02788 710 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 SOD2P04179 222 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 EPHA5P54756 1037 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 RAB33AQ14088 237 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 PHF19Q5T6S3 580 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 CD276Q5ZPR3 534 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 KCTD1Q719H9 257 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 ZNF669Q96BR6 464 aaPredicted RBP6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 ALG1Q9BT22 464 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 SRRDQ9UH36 339 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 ZFP69BQ9UJL9 534 aa6.29□□□□□ -1.4
CHMP2B-202ENST00000466696 PATE3B3GLJ2 98 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 NKRFO15226 690 aaKnown RBP eCLIP6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 PFKPQ01813 784 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 CDSNQ15517 529 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 AJUBAQ96IF1 538 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 SEMA4AQ9H3S1 761 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 SEC61A2Q9H9S3 476 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 KCND1Q9NSA2 647 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 TCAF1Q9Y4C2 921 aa6.28□□□□□ -1.4
CHMP2B-202ENST00000466696 BLACEA4D250 179 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 ZNF839A8K0R7 811 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 GLRBP48167 497 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 REXO1L1PQ8IX06 675 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 IFNL2Q8IZJ0 200 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 STPG3Q8N7X2 389 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 PTPN18Q99952 460 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 TRIM55Q9BYV6 548 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 MEGF9Q9H1U4 602 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 TELO2Q9Y4R8 837 aa6.27□□□□□ -1.41
CHMP2B-202ENST00000466696 H0Y858 1186 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 ZNF623O75123 536 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 FSHBP01225 129 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 C6P13671 934 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 SELENOPP49908 381 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 YOD1Q5VVQ6 348 aaPredicted RBP6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 SLC16A11Q8NCK7 471 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 IPPKQ9H8X2 491 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
CHMP2B-202ENST00000466696 CNOT4O95628 575 aaKnown RBP6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 TACR2P21452 398 aa6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 CSF2RBP32927 897 aa6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 NLGN4XQ8N0W4 816 aa6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 SPATA9Q9BWV2 254 aa6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 KATNBL1Q9H079 304 aa6.25□□□□□ -1.41
CHMP2B-202ENST00000466696 ACOT7O00154 380 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 AQP7O14520 342 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 U2SURPO15042 1029 aaKnown RBP6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 MUSKO15146 869 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 GDF5P43026 501 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 PAK1Q13153 545 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 USP10Q14694 798 aaKnown RBP6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 ZNF568Q3ZCX4 644 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 HS1BP3Q53T59 392 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 DPP8Q6V1X1 898 aaPredicted RBP6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 MAMDC2Q7Z304 686 aaPredicted RBP6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 SCUBE1Q8IWY4 988 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 PALM2Q8IXS6 379 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 CKAP2LQ8IYA6 745 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 WWC2-AS2Q96NR7 200 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 LMF1Q96S06 567 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 TESMINQ9Y4I5 508 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 ASXL2Q76L83 1435 aa6.24□□□□□ -1.41
CHMP2B-202ENST00000466696 STK10O94804 968 aaKnown RBP6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 IL18BPO95998 194 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 DBPQ10586 325 aaPredicted RBP6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 R3HDM1Q15032 1099 aaKnown RBP6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 CRIP3Q6Q6R5 217 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 GPR155Q7Z3F1 870 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 MTDHQ86UE4 582 aaKnown RBP6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 Q8TCH9 128 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 PTPRN2Q92932 1015 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 ZNF428Q96B54 188 aa6.23□□□□□ -1.41
CHMP2B-202ENST00000466696 CDC6Q99741 560 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms