RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 EARS2Q5JPH6 523 aaKnown RBP29.43■■■□□ 2.3
SMC4-206ENST00000465903 KRT40Q6A162 431 aa29.43■■■□□ 2.3
SMC4-206ENST00000465903 MFSD5Q6N075 450 aa29.43■■■□□ 2.3
SMC4-206ENST00000465903 C7orf31Q8N865 590 aa29.43■■■□□ 2.3
SMC4-206ENST00000465903 TNFRSF25Q93038 417 aa29.43■■■□□ 2.3
SMC4-206ENST00000465903 MYH9P35579 1960 aaKnown RBP29.43■■■□□ 2.3
SMC4-206ENST00000465903 CYP3A7-CYP3A51PA0A087WV96 503 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 IPO5O00410 1097 aaKnown RBP29.42■■■□□ 2.3
SMC4-206ENST00000465903 CYP3A7P24462 503 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 FOSBP53539 338 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 ACTR2P61160 394 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 PTGISQ16647 500 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 TMX3Q96JJ7 454 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 PCYT2Q99447 389 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 ZNF577Q9BSK1 485 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 HIPK3Q9H422 1215 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 SCN5AQ14524 2016 aa29.42■■■□□ 2.3
SMC4-206ENST00000465903 LGR5O75473 907 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 ATG7O95352 703 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 TDP2O95551 362 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 CCNE2O96020 404 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 MMP1P03956 469 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 KRT2P35908 639 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 EPHB4P54760 987 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 NR5A1Q13285 461 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 Q4G0T1 1027 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 MBOAT7Q96N66 472 aa29.41■■■□□ 2.3
SMC4-206ENST00000465903 CCDC194A0A1B0GVG4 234 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 A0A1W2PPC1 479 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 DDX39AO00148 427 aaKnown RBP29.4■■■□□ 2.3
SMC4-206ENST00000465903 MSH4O15457 936 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 HOXC8P31273 242 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 ZNF200P98182 395 aaPredicted RBP29.4■■■□□ 2.3
SMC4-206ENST00000465903 MOXD1Q6UVY6 613 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 PIK3AP1Q6ZUJ8 805 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 WNT8AQ9H1J5 351 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 RNPEPQ9H4A4 650 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 TBC1D22BQ9NU19 505 aa29.4■■■□□ 2.3
SMC4-206ENST00000465903 FAM205CA6NFA0 338 aa29.39■■■□□ 2.3
SMC4-206ENST00000465903 SMIM10L2AP0DMW4 78 aa29.39■■■□□ 2.3
SMC4-206ENST00000465903 SMIM10L2BP0DMW5 78 aa29.39■■■□□ 2.3
SMC4-206ENST00000465903 HMGN5P82970 282 aaKnown RBP29.39■■■□□ 2.3
SMC4-206ENST00000465903 EMSYQ7Z589 1322 aa29.39■■■□□ 2.3
SMC4-206ENST00000465903 BTBD18B2RXH4 712 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 MCM2P49736 904 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 CCL23P55773 120 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 FPGSQ05932 587 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 DIS3L2Q8IYB7 885 aaKnown RBP29.38■■■□□ 2.29
SMC4-206ENST00000465903 TDHQ8IZJ6 230 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 DHX38Q92620 1227 aaKnown RBP29.38■■■□□ 2.29
SMC4-206ENST00000465903 SMARCAD1Q9H4L7 1026 aa29.38■■■□□ 2.29
SMC4-206ENST00000465903 ZNF215Q9UL58 517 aaPredicted RBP29.38■■■□□ 2.29
SMC4-206ENST00000465903 IGKV6D-21A0A0A0MT36 114 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 GUCY1B3Q02153 619 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 TRIM29Q14134 588 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 ABHD15Q6UXT9 468 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 SLC5A5Q92911 643 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 NOD1Q9Y239 953 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 TANC1Q9C0D5 1861 aa29.37■■■□□ 2.29
SMC4-206ENST00000465903 CSF2RAP15509 400 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 LETM2Q2VYF4 491 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 C9orf50Q5SZB4 431 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 C16orf59Q7L2K0 433 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 NEK8Q86SG6 692 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 TMEM199Q8N511 208 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 GLG1Q92896 1179 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 GJA10Q969M2 543 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 BRMS1Q9HCU9 246 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 TET1Q8NFU7 2136 aa29.36■■■□□ 2.29
SMC4-206ENST00000465903 C17orf102A2RUQ5 167 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 SHHQ15465 462 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 WNT8BQ93098 351 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 VWCEQ96DN2 955 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 SCLYQ96I15 445 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 C8orf76Q96K31 380 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 SETD4Q9NVD3 440 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 ERAP1Q9NZ08 941 aa29.35■■■□□ 2.29
SMC4-206ENST00000465903 SLC37A4O43826 429 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 MARK3P27448 753 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 ADAM17P78536 824 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 PTK7Q13308 1070 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 TRIM71Q2Q1W2 868 aaKnown RBP29.34■■■□□ 2.29
SMC4-206ENST00000465903 PPP4R3AQ6IN85 833 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 ZNF746Q6NUN9 644 aaPredicted RBP29.34■■■□□ 2.29
SMC4-206ENST00000465903 PLPPR4Q7Z2D5 763 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 FAM184AQ8NB25 1140 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 FBXO18Q8NFZ0 1043 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 ETNPPLQ8TBG4 499 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 RIT2Q99578 217 aa29.34■■■□□ 2.29
SMC4-206ENST00000465903 DDX25Q9UHL0 483 aaKnown RBP29.34■■■□□ 2.29
SMC4-206ENST00000465903 PITPNM1O00562 1244 aa29.33■■■□□ 2.29
SMC4-206ENST00000465903 TREHO43280 583 aa29.33■■■□□ 2.29
SMC4-206ENST00000465903 PSMD10O75832 226 aa29.33■■■□□ 2.29
SMC4-206ENST00000465903 STAT5BP51692 787 aa29.33■■■□□ 2.29
SMC4-206ENST00000465903 PPIGQ13427 754 aaKnown RBP eCLIP29.33■■■□□ 2.29
SMC4-206ENST00000465903 ATP6V0A1Q93050 837 aa29.33■■■□□ 2.29
SMC4-206ENST00000465903 ACRP10323 421 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 KRT76Q01546 638 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 RBL2Q08999 1139 aa29.32■■■□□ 2.28
SMC4-206ENST00000465903 BFSP2Q13515 415 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms