RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 ZNF428Q96B54 188 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 NUDT11Q96G61 164 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 PDGFDQ9GZP0 370 aaPredicted RBP8.17□□□□□ -1.1
SMC4-205ENST00000465563 ADAM29Q9UKF5 820 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 DSEQ9UL01 958 aa8.17□□□□□ -1.1
SMC4-205ENST00000465563 FAM47E-STBD1D6RA91 191 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 NKRFO15226 690 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMC4-205ENST00000465563 GPR42O15529 346 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 LTFP02788 710 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 SOD2P04179 222 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 ICAM4Q14773 271 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 HABP4Q5JVS0 413 aaKnown RBP8.16□□□□□ -1.1
SMC4-205ENST00000465563 SLFN13Q68D06 897 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.16□□□□□ -1.1
SMC4-205ENST00000465563 TSC22D4Q9Y3Q8 395 aa8.16□□□□□ -1.1
SMC4-205ENST00000465563 BLACEA4D250 179 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 KLHL18O94889 574 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 ENO2P09104 434 aaPredicted RBP8.15□□□□□ -1.1
SMC4-205ENST00000465563 SKIDA1Q1XH10 827 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 ZNF669Q96BR6 464 aaPredicted RBP8.15□□□□□ -1.1
SMC4-205ENST00000465563 ALG1Q9BT22 464 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 TRIM55Q9BYV6 548 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 ARHGAP20Q9P2F6 1191 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 ZFP69BQ9UJL9 534 aa8.15□□□□□ -1.1
SMC4-205ENST00000465563 KNG1P01042 644 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 GLRBP48167 497 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 EPHA5P54756 1037 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 PFKPQ01813 784 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 YOD1Q5VVQ6 348 aaPredicted RBP8.14□□□□□ -1.11
SMC4-205ENST00000465563 CD276Q5ZPR3 534 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 Q6ZUG5 572 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 KCTD1Q719H9 257 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 DNERQ8NFT8 737 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 CDK5RAP1Q96SZ6 601 aaKnown RBP8.14□□□□□ -1.11
SMC4-205ENST00000465563 KLC2Q9H0B6 622 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 CD248Q9HCU0 757 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 TELO2Q9Y4R8 837 aa8.14□□□□□ -1.11
SMC4-205ENST00000465563 RALYLQ86SE5 291 aaKnown RBP8.13□□□□□ -1.11
SMC4-205ENST00000465563 STPG3Q8N7X2 389 aa8.13□□□□□ -1.11
SMC4-205ENST00000465563 SH3RF3Q8TEJ3 882 aaPredicted RBP8.13□□□□□ -1.11
SMC4-205ENST00000465563 PTPN18Q99952 460 aa8.13□□□□□ -1.11
SMC4-205ENST00000465563 DEF6Q9H4E7 631 aa8.13□□□□□ -1.11
SMC4-205ENST00000465563 IPPKQ9H8X2 491 aa8.13□□□□□ -1.11
SMC4-205ENST00000465563 KCND1Q9NSA2 647 aa8.12□□□□□ -1.11
SMC4-205ENST00000465563 ZNF839A8K0R7 811 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 AKAP8O43823 692 aaKnown RBP8.11□□□□□ -1.11
SMC4-205ENST00000465563 CDSNQ15517 529 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 SPRED1Q7Z699 444 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 AJUBAQ96IF1 538 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
SMC4-205ENST00000465563 PATE3B3GLJ2 98 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 ACOT7O00154 380 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 U2SURPO15042 1029 aaKnown RBP8.1□□□□□ -1.11
SMC4-205ENST00000465563 ZNF585AQ6P3V2 769 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 CKAP2LQ8IYA6 745 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 CD244Q9BZW8 370 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 MEGF9Q9H1U4 602 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 SEC61A2Q9H9S3 476 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 TCAF1Q9Y4C2 921 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 TRAF6Q9Y4K3 522 aa8.1□□□□□ -1.11
SMC4-205ENST00000465563 H0Y858 1186 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 STK10O94804 968 aaKnown RBP8.09□□□□□ -1.11
SMC4-205ENST00000465563 CNOT4O95628 575 aaKnown RBP8.09□□□□□ -1.11
SMC4-205ENST00000465563 CSF2RBP32927 897 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 RBM25P49756 843 aaKnown RBP8.09□□□□□ -1.11
SMC4-205ENST00000465563 PAK1Q13153 545 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 SCUBE1Q8IWY4 988 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 REXO1L1PQ8IX06 675 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 SLC4A7Q9Y6M7 1214 aa8.09□□□□□ -1.11
SMC4-205ENST00000465563 AQP7O14520 342 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 ZNF623O75123 536 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 IL18BPO95998 194 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 FSHBP01225 129 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 SELENOPP49908 381 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 SPATC1Q76KD6 591 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 MAMDC2Q7Z304 686 aaPredicted RBP8.08□□□□□ -1.12
SMC4-205ENST00000465563 IFNL2Q8IZJ0 200 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 NLGN4XQ8N0W4 816 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 SH3RF2Q8TEC5 729 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 CDC6Q99741 560 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 TACO1Q9BSH4 297 aaKnown RBP8.08□□□□□ -1.12
SMC4-205ENST00000465563 KATNBL1Q9H079 304 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 SEMA4AQ9H3S1 761 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 SRRDQ9UH36 339 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 MSRB2Q9Y3D2 182 aa8.08□□□□□ -1.12
SMC4-205ENST00000465563 PDPK1O15530 556 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 C6P13671 934 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 DBPQ10586 325 aaPredicted RBP8.07□□□□□ -1.12
SMC4-205ENST00000465563 BTBD8Q5XKL5 378 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 GPR155Q7Z3F1 870 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 MTDHQ86UE4 582 aaKnown RBP8.07□□□□□ -1.12
SMC4-205ENST00000465563 PALM2Q8IXS6 379 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 SLC16A11Q8NCK7 471 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 WWC2-AS2Q96NR7 200 aa8.07□□□□□ -1.12
SMC4-205ENST00000465563 IPO9Q96P70 1041 aaKnown RBP8.07□□□□□ -1.12
SMC4-205ENST00000465563 TCRBV5S4A2TA0A5A2 114 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 TACR2P21452 398 aa8.06□□□□□ -1.12
SMC4-205ENST00000465563 USP10Q14694 798 aaKnown RBP8.06□□□□□ -1.12
SMC4-205ENST00000465563 GPR19Q15760 415 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms