RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TELO2Q9Y4R8 837 aa8.63□□□□□ -1.03
PTCD3-205ENST00000464541 KRT15P19012 456 aa8.62□□□□□ -1.03
PTCD3-205ENST00000464541 KRTAP19-4Q3LI73 84 aa8.62□□□□□ -1.03
PTCD3-205ENST00000464541 TM4SF20Q53R12 229 aa8.62□□□□□ -1.03
PTCD3-205ENST00000464541 CISD2Q8N5K1 135 aaKnown RBP8.62□□□□□ -1.03
PTCD3-205ENST00000464541 TMEM209Q96SK2 561 aa8.62□□□□□ -1.03
PTCD3-205ENST00000464541 SLC12A8A0AV02 714 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 PTPN1P18031 435 aaKnown RBP8.61□□□□□ -1.03
PTCD3-205ENST00000464541 MECP2P51608 486 aaKnown RBP8.61□□□□□ -1.03
PTCD3-205ENST00000464541 ZNF460Q14592 562 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 BTBD8Q5XKL5 378 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 OTOP1Q7RTM1 612 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 LRRTM3Q86VH5 581 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 KIF18BQ86Y91 864 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 LRRC56Q8IYG6 542 aaPredicted RBP8.61□□□□□ -1.03
PTCD3-205ENST00000464541 PPM1KQ8N3J5 372 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 FAM26EQ8N5C1 309 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 C2orf69Q8N8R5 385 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 KYQ8NBH2 561 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 CHST14Q8NCH0 376 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 WRNIP1Q96S55 665 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 C11orf84Q9BUA3 381 aaPredicted RBP8.61□□□□□ -1.03
PTCD3-205ENST00000464541 CABP5Q9NP86 173 aa8.61□□□□□ -1.03
PTCD3-205ENST00000464541 M0R2C6 588 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 GLRX3O76003 335 aaKnown RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 LTFP02788 710 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 JMJD7P0C870 316 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 AFF3P51826 1226 aaKnown RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 GRIN1Q05586 938 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 CFAP100Q494V2 611 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 TCERG1LQ5VWI1 586 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 CDCA2Q69YH5 1023 aaPredicted RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 RBM12BQ8IXT5 1001 aaKnown RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 AHI1Q8N157 1196 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 DDX1Q92499 740 aaKnown RBP8.6□□□□□ -1.03
PTCD3-205ENST00000464541 WNK4Q96J92 1243 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 GORASP1Q9BQQ3 440 aa8.6□□□□□ -1.03
PTCD3-205ENST00000464541 CFPP27918 469 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 GYS2P54840 703 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 ITGA1P56199 1179 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 HERVK_113P62684 666 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 PIK3R6Q5UE93 754 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 SAPCD2Q86UD0 394 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 NOSTRINQ8IVI9 506 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 DHX37Q8IY37 1157 aaKnown RBP8.59□□□□□ -1.03
PTCD3-205ENST00000464541 BOCQ9BWV1 1114 aa8.59□□□□□ -1.03
PTCD3-205ENST00000464541 CBX4O00257 560 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 CYP7B1O75881 506 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 VASNQ6EMK4 673 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 SIAH1Q8IUQ4 282 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 IRF2BPLQ9H1B7 796 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 KCNH7Q9NS40 1196 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 RIC8BQ9NVN3 520 aa8.58□□□□□ -1.04
PTCD3-205ENST00000464541 SH3D21A4FU49 640 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 FAM90A27PA6NNH2 459 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 ACOT7O00154 380 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 SMARCA5O60264 1052 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-205ENST00000464541 HIP1RO75146 1068 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 ENO2P09104 434 aaPredicted RBP8.57□□□□□ -1.04
PTCD3-205ENST00000464541 VWA3BQ502W6 1294 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 CD276Q5ZPR3 534 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 PROSER1Q86XN7 944 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 LINC01356Q8N9X3 169 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 ZBTB8AQ96BR9 441 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 CLIC6Q96NY7 704 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 NOX5Q96PH1 765 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 KRTAP4-12Q9BQ66 201 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 DLL4Q9NR61 685 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 B4GALT6Q9UBX8 382 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 B3GALT1Q9Y5Z6 326 aa8.57□□□□□ -1.04
PTCD3-205ENST00000464541 TRAF5O00463 557 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 C4BPAP04003 597 aaKnown RBP8.56□□□□□ -1.04
PTCD3-205ENST00000464541 THBS2P35442 1172 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 NEK4P51957 841 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 IRF9Q00978 393 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 DBPQ10586 325 aaPredicted RBP8.56□□□□□ -1.04
PTCD3-205ENST00000464541 ADAM9Q13443 819 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 EGFLAMQ63HQ2 1017 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 CNNM4Q6P4Q7 775 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 TTLL7Q6ZT98 887 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 DTX3Q8N9I9 347 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 DLG3Q92796 817 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 MAPRE3Q9UPY8 281 aa8.56□□□□□ -1.04
PTCD3-205ENST00000464541 FAM83GA6ND36 823 aa8.55□□□□□ -1.04
PTCD3-205ENST00000464541 SDHAP31040 664 aa8.55□□□□□ -1.04
PTCD3-205ENST00000464541 KRTAP19-1Q8IUB9 90 aa8.55□□□□□ -1.04
PTCD3-205ENST00000464541 TARS2Q9BW92 718 aaKnown RBP8.55□□□□□ -1.04
PTCD3-205ENST00000464541 NTMQ9P121 344 aa8.55□□□□□ -1.04
PTCD3-205ENST00000464541 PRKAB1Q9Y478 270 aa8.55□□□□□ -1.04
PTCD3-205ENST00000464541 CADPSQ9ULU8 1353 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 ZNF839A8K0R7 811 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 GSG1L2A8MUP6 293 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 SCDO00767 359 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 FFAR3O14843 346 aa8.54□□□□□ -1.04
PTCD3-205ENST00000464541 CHGBP05060 677 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms