RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 PIK3CDO00329 1044 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 NCK2O43639 380 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 UPP2O95045 317 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 LINC00271P0C7V0 271 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 ZP2Q05996 745 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 WTAPQ15007 396 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 TAF2Q6P1X5 1199 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 GIMAP8Q8ND71 665 aaPredicted RBP19.95■□□□□ 0.78
HMGN1-209ENST00000463631 IL17RAQ96F46 866 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 SPZ1Q9BXG8 430 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 LMAN2LQ9H0V9 348 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 RWDD3Q9Y3V2 267 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 ZNF318Q5VUA4 2279 aa19.95■□□□□ 0.78
HMGN1-209ENST00000463631 TRIOO75962 3097 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 TTC3P53804 2025 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 RB1P06400 928 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 ARHGAP4P98171 946 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 RALYLQ86SE5 291 aaKnown RBP19.94■□□□□ 0.78
HMGN1-209ENST00000463631 FIBCD1Q8N539 461 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 MAP3K14Q99558 947 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 C11orf84Q9BUA3 381 aaPredicted RBP19.94■□□□□ 0.78
HMGN1-209ENST00000463631 EHMT1Q9H9B1 1298 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 ADGRA3Q8IWK6 1321 aa19.94■□□□□ 0.78
HMGN1-209ENST00000463631 POTEB3A0JP26 581 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 C19orf67A6NJJ6 358 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 DCXO43602 365 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 CHRNA1P02708 482 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 CTC1Q2NKJ3 1217 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 POTEBQ6S5H4 581 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 CATIPQ7Z7H3 387 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 NCOA7Q8NI08 942 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 CLP1Q92989 425 aaKnown RBP19.93■□□□□ 0.78
HMGN1-209ENST00000463631 RTEL1Q9NZ71 1219 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 TELO2Q9Y4R8 837 aa19.93■□□□□ 0.78
HMGN1-209ENST00000463631 E7EWF7 191 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 MEIS2O14770 477 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 GSPT1P15170 499 aaKnown RBP19.92■□□□□ 0.78
HMGN1-209ENST00000463631 SMARCA1P28370 1054 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 CTNNB1P35222 781 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 LTBRP36941 435 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 NLRX1Q86UT6 975 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 ADHFE1Q8IWW8 467 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 GPRASP2Q96D09 838 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 TAF6LQ9Y6J9 622 aa19.92■□□□□ 0.78
HMGN1-209ENST00000463631 MBLAC1A4D2B0 266 aaPredicted RBP19.91■□□□□ 0.78
HMGN1-209ENST00000463631 TCF7P36402 384 aaPredicted RBP19.91■□□□□ 0.78
HMGN1-209ENST00000463631 BMPR1AP36894 532 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 ANTXR2P58335 489 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 PTH1RQ03431 593 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 MGAT3Q09327 533 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 LPIN1Q14693 890 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 TTC22Q5TAA0 569 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 UTP14CQ5TAP6 766 aaKnown RBP19.91■□□□□ 0.78
HMGN1-209ENST00000463631 USP17L6PQ6QN14 398 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 SMARCC2Q8TAQ2 1214 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 RUFY2Q8WXA3 655 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 CUL5Q93034 780 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 CDHR1Q96JP9 859 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 CLDND1Q9NY35 253 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 C5orf42Q9H799 3197 aa19.91■□□□□ 0.78
HMGN1-209ENST00000463631 DDAH1O94760 285 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 RPLP2P05387 115 aaKnown RBP19.9■□□□□ 0.78
HMGN1-209ENST00000463631 GHRP10912 638 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 KCNA2P16389 499 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 KIF5BP33176 963 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 PPFIA1Q13136 1202 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 RUFY4Q6ZNE9 571 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 RSPH3Q86UC2 560 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 MB21D2Q8IYB1 491 aaPredicted RBP19.9■□□□□ 0.78
HMGN1-209ENST00000463631 IGDCC4Q8TDY8 1250 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 RRP36Q96EU6 259 aaKnown RBP19.9■□□□□ 0.78
HMGN1-209ENST00000463631 ERAP1Q9NZ08 941 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 TUBE1Q9UJT0 475 aa19.9■□□□□ 0.78
HMGN1-209ENST00000463631 SP4Q02446 784 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 SMAD2Q15796 467 aaKnown RBP19.89■□□□□ 0.77
HMGN1-209ENST00000463631 CSPP1Q1MSJ5 1256 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 FBXO47Q5MNV8 452 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 ZNF654Q8IZM8 581 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 CTCFLQ8NI51 663 aaPredicted RBP19.89■□□□□ 0.77
HMGN1-209ENST00000463631 ZNF689Q96CS4 500 aaPredicted RBP19.89■□□□□ 0.77
HMGN1-209ENST00000463631 LZTS2Q9BRK4 669 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 MTA3Q9BTC8 594 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 PLVAPQ9BX97 442 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 KCNH6Q9H252 994 aa19.89■□□□□ 0.77
HMGN1-209ENST00000463631 SEC63Q9UGP8 760 aaKnown RBP19.89■□□□□ 0.77
HMGN1-209ENST00000463631 SUPT16HQ9Y5B9 1047 aaKnown RBP19.89■□□□□ 0.77
HMGN1-209ENST00000463631 KIAA1671Q9BY89 1806 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 GRM6O15303 877 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 MMP1P03956 469 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 CHMLP26374 656 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 PDE4AP27815 886 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 HYAL1Q12794 435 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 GRIK4Q16099 956 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 TSHZ1Q6ZSZ6 1077 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 PIBF1Q8WXW3 757 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 LY9Q9HBG7 655 aa19.88■□□□□ 0.77
HMGN1-209ENST00000463631 GSTTP1A0A1W2PQM5 241 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 ENPP3O14638 875 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 ATP9AO75110 1047 aa19.87■□□□□ 0.77
HMGN1-209ENST00000463631 ITGB5P18084 799 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms