RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 VSIG10LQ86VR7 867 aa17.78■□□□□ 0.44
APP-211ENST00000462267 CMTR2Q8IYT2 770 aaKnown RBP17.78■□□□□ 0.44
APP-211ENST00000462267 ADGRF4Q8IZF3 695 aa17.78■□□□□ 0.44
APP-211ENST00000462267 EHMT1Q9H9B1 1298 aa17.78■□□□□ 0.44
APP-211ENST00000462267 MRPL42Q9Y6G3 142 aaKnown RBP17.78■□□□□ 0.44
APP-211ENST00000462267 DCHS1Q96JQ0 3298 aa17.78■□□□□ 0.44
APP-211ENST00000462267 FSD2A1L4K1 749 aa17.77■□□□□ 0.44
APP-211ENST00000462267 CHRNA1P02708 482 aa17.77■□□□□ 0.44
APP-211ENST00000462267 GHRP10912 638 aa17.77■□□□□ 0.44
APP-211ENST00000462267 HSD17B4P51659 736 aa17.77■□□□□ 0.44
APP-211ENST00000462267 ADAM17P78536 824 aa17.77■□□□□ 0.44
APP-211ENST00000462267 GHRHRQ02643 423 aa17.77■□□□□ 0.44
APP-211ENST00000462267 QRICH1Q2TAL8 776 aa17.77■□□□□ 0.44
APP-211ENST00000462267 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
APP-211ENST00000462267 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.44
APP-211ENST00000462267 KLHL23Q8NBE8 558 aa17.77■□□□□ 0.44
APP-211ENST00000462267 POF1BQ8WVV4 589 aa17.77■□□□□ 0.44
APP-211ENST00000462267 NKD2Q969F2 451 aaPredicted RBP17.77■□□□□ 0.44
APP-211ENST00000462267 TLE6Q9H808 572 aa17.77■□□□□ 0.44
APP-211ENST00000462267 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
APP-211ENST00000462267 TTC3P53804 2025 aa17.76■□□□□ 0.43
APP-211ENST00000462267 NOP56O00567 594 aaKnown RBP17.76■□□□□ 0.43
APP-211ENST00000462267 PDGFBP01127 241 aaPredicted RBP17.76■□□□□ 0.43
APP-211ENST00000462267 PCP11498 1178 aaKnown RBP17.76■□□□□ 0.43
APP-211ENST00000462267 ZBTB33Q86T24 672 aa17.76■□□□□ 0.43
APP-211ENST00000462267 PI4K2BQ8TCG2 481 aa17.76■□□□□ 0.43
APP-211ENST00000462267 FGAP02671 866 aa17.75■□□□□ 0.43
APP-211ENST00000462267 ARHGAP4P98171 946 aa17.75■□□□□ 0.43
APP-211ENST00000462267 LPIN1Q14693 890 aa17.75■□□□□ 0.43
APP-211ENST00000462267 PGM5Q15124 567 aa17.75■□□□□ 0.43
APP-211ENST00000462267 MCTP2Q6DN12 878 aa17.75■□□□□ 0.43
APP-211ENST00000462267 TAF2Q6P1X5 1199 aa17.75■□□□□ 0.43
APP-211ENST00000462267 DGKHQ86XP1 1220 aa17.75■□□□□ 0.43
APP-211ENST00000462267 SAMD3Q8N6K7 520 aa17.75■□□□□ 0.43
APP-211ENST00000462267 ATP8B4Q8TF62 1192 aa17.75■□□□□ 0.43
APP-211ENST00000462267 LMBR1Q8WVP7 490 aa17.75■□□□□ 0.43
APP-211ENST00000462267 DCTPP1Q9H773 170 aa17.75■□□□□ 0.43
APP-211ENST00000462267 ZNF215Q9UL58 517 aaPredicted RBP17.75■□□□□ 0.43
APP-211ENST00000462267 ASPRV1Q53RT3 343 aa17.74■□□□□ 0.43
APP-211ENST00000462267 MFSD6Q6ZSS7 791 aa17.74■□□□□ 0.43
APP-211ENST00000462267 UBALD2Q8IYN6 164 aa17.74■□□□□ 0.43
APP-211ENST00000462267 MIER1Q8N108 512 aa17.74■□□□□ 0.43
APP-211ENST00000462267 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
APP-211ENST00000462267 CDCA3Q99618 268 aaPredicted RBP17.74■□□□□ 0.43
APP-211ENST00000462267 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
APP-211ENST00000462267 OPLAHO14841 1288 aa17.73■□□□□ 0.43
APP-211ENST00000462267 DHX16O60231 1041 aaKnown RBP17.73■□□□□ 0.43
APP-211ENST00000462267 CCND2P30279 289 aa17.73■□□□□ 0.43
APP-211ENST00000462267 UBE3AQ05086 875 aa17.73■□□□□ 0.43
APP-211ENST00000462267 MGAT3Q09327 533 aa17.73■□□□□ 0.43
APP-211ENST00000462267 METTL7BQ6UX53 244 aa17.73■□□□□ 0.43
APP-211ENST00000462267 RSPH3Q86UC2 560 aa17.73■□□□□ 0.43
APP-211ENST00000462267 ADSSL1Q8N142 457 aa17.73■□□□□ 0.43
APP-211ENST00000462267 CRIPAKQ8N1N5 446 aa17.73■□□□□ 0.43
APP-211ENST00000462267 TMEM105Q8N8V8 129 aa17.73■□□□□ 0.43
APP-211ENST00000462267 PNMA1Q8ND90 353 aa17.73■□□□□ 0.43
APP-211ENST00000462267 IL31RAQ8NI17 732 aa17.73■□□□□ 0.43
APP-211ENST00000462267 MICAL1Q8TDZ2 1067 aa17.73■□□□□ 0.43
APP-211ENST00000462267 GPKOWQ92917 476 aaPredicted RBP eCLIP17.73■□□□□ 0.43
APP-211ENST00000462267 AMNQ9BXJ7 453 aa17.73■□□□□ 0.43
APP-211ENST00000462267 JMJD4Q9H9V9 463 aa17.73■□□□□ 0.43
APP-211ENST00000462267 VPS13AQ96RL7 3174 aa17.72■□□□□ 0.43
APP-211ENST00000462267 SRGAP2BP0DMP2 458 aa17.72■□□□□ 0.43
APP-211ENST00000462267 NEDD9Q14511 834 aa17.72■□□□□ 0.43
APP-211ENST00000462267 CCDC178Q5BJE1 867 aa17.72■□□□□ 0.43
APP-211ENST00000462267 FBXO47Q5MNV8 452 aa17.72■□□□□ 0.43
APP-211ENST00000462267 TSHZ1Q6ZSZ6 1077 aa17.72■□□□□ 0.43
APP-211ENST00000462267 FRMD5Q7Z6J6 570 aa17.72■□□□□ 0.43
APP-211ENST00000462267 NPAS4Q8IUM7 802 aa17.72■□□□□ 0.43
APP-211ENST00000462267 KREMEN2Q8NCW0 462 aa17.72■□□□□ 0.43
APP-211ENST00000462267 GPR20Q99678 358 aa17.72■□□□□ 0.43
APP-211ENST00000462267 BCAS3Q9H6U6 928 aa17.72■□□□□ 0.43
APP-211ENST00000462267 HELLSQ9NRZ9 838 aa17.72■□□□□ 0.43
APP-211ENST00000462267 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
APP-211ENST00000462267 PER2O15055 1255 aa17.71■□□□□ 0.43
APP-211ENST00000462267 STAG3L1P0CL83 205 aa17.71■□□□□ 0.43
APP-211ENST00000462267 MTMR3Q13615 1198 aa17.71■□□□□ 0.43
APP-211ENST00000462267 DUSP6Q16828 381 aa17.71■□□□□ 0.43
APP-211ENST00000462267 GNPTABQ3T906 1256 aa17.71■□□□□ 0.43
APP-211ENST00000462267 TMEM184AQ6ZMB5 413 aa17.71■□□□□ 0.43
APP-211ENST00000462267 TRIM50Q86XT4 487 aa17.71■□□□□ 0.43
APP-211ENST00000462267 VN1R2Q8NFZ6 395 aa17.71■□□□□ 0.43
APP-211ENST00000462267 ESR2Q92731 530 aa17.71■□□□□ 0.43
APP-211ENST00000462267 FTHL17Q9BXU8 183 aa17.71■□□□□ 0.43
APP-211ENST00000462267 S1PR5Q9H228 398 aa17.71■□□□□ 0.43
APP-211ENST00000462267 RNF41Q9H4P4 317 aaPredicted RBP17.71■□□□□ 0.43
APP-211ENST00000462267 VAT1LQ9HCJ6 419 aa17.71■□□□□ 0.43
APP-211ENST00000462267 SORCS3Q9UPU3 1222 aa17.71■□□□□ 0.43
APP-211ENST00000462267 NR2E1Q9Y466 385 aa17.71■□□□□ 0.43
APP-211ENST00000462267 PCDHGC5Q9Y5F6 944 aa17.71■□□□□ 0.43
APP-211ENST00000462267 CACNA1BQ00975 2339 aa17.7■□□□□ 0.42
APP-211ENST00000462267 DMDP11532 3685 aa17.7■□□□□ 0.42
APP-211ENST00000462267 PARP1P09874 1014 aaKnown RBP17.7■□□□□ 0.42
APP-211ENST00000462267 HOXA13P31271 388 aaPredicted RBP17.7■□□□□ 0.42
APP-211ENST00000462267 NT5C2P49902 561 aa17.7■□□□□ 0.42
APP-211ENST00000462267 HAND2P61296 217 aa17.7■□□□□ 0.42
APP-211ENST00000462267 RBM10P98175 930 aaKnown RBP17.7■□□□□ 0.42
APP-211ENST00000462267 HNRNPUQ00839 825 aaKnown RBP eCLIP17.7■□□□□ 0.42
APP-211ENST00000462267 PAN2Q504Q3 1202 aaKnown RBP17.7■□□□□ 0.42
APP-211ENST00000462267 ASTLQ6HA08 431 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms