RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KRT40Q6A162 431 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 GDF6Q6KF10 455 aaPredicted RBP12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 PIK3AP1Q6ZUJ8 805 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 TMEM199Q8N511 208 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 OXER1Q8TDS5 423 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 GLG1Q92896 1179 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 C8orf76Q96K31 380 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 PRO3102Q9H379 93 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 SMARCAD1Q9H4L7 1026 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 AZI2Q9H6S1 392 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 TBC1D22BQ9NU19 505 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 GTF2IRD1Q9UHL9 959 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 CEP290O15078 2479 aa12.01□□□□□ -0.49
TRAPPC12-213ENST00000461577 A0A1W2PPC1 479 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 MMP1P03956 469 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 SMIM10L2AP0DMW4 78 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 SMIM10L2BP0DMW5 78 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 ACTR2P61160 394 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 GUCY1B3Q02153 619 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 PPIGQ13427 754 aaKnown RBP eCLIP12□□□□□ -0.491e-6■■■□□ 17.8
TRAPPC12-213ENST00000461577 LETM2Q2VYF4 491 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 HABP4Q5JVS0 413 aaKnown RBP12□□□□□ -0.49
TRAPPC12-213ENST00000461577 MFSD5Q6N075 450 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 MOXD1Q6UVY6 613 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 TRIM50Q86XT4 487 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 CCDC155Q8N6L0 562 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 RETREG2Q8NC44 543 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 TMX3Q96JJ7 454 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 NAP1L4Q99733 375 aaKnown RBP12□□□□□ -0.49
TRAPPC12-213ENST00000461577 NOC4LQ9BVI4 516 aaKnown RBP12□□□□□ -0.49
TRAPPC12-213ENST00000461577 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
TRAPPC12-213ENST00000461577 TRIP12Q14669 1992 aaPredicted RBP11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 CYP3A7-CYP3A51PA0A087WV96 503 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 EDIL3O43854 480 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 LGR5O75473 907 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 CD2BP2O95400 341 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 TDP2O95551 362 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 GNAT1P11488 350 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 CYP3A7P24462 503 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 MARK3P27448 753 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 CCL23P55773 120 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 KRT76Q01546 638 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 NR5A1Q13285 461 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 BFSP2Q13515 415 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 Q4G0T1 1027 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 FAM160B1Q5W0V3 765 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 MIS18BP1Q6P0N0 1132 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 NEK8Q86SG6 692 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 DIS3L2Q8IYB7 885 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 TDHQ8IZJ6 230 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 TEKT3Q9BXF9 490 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 DDX25Q9UHL0 483 aaKnown RBP11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 KIF3AQ9Y496 699 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 EMSYQ7Z589 1322 aa11.99□□□□□ -0.49
TRAPPC12-213ENST00000461577 UMODL1Q5DID0 1318 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 BTBD18B2RXH4 712 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 BACH1O14867 736 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 MSH4O15457 936 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 DHX15O43143 795 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 MARCH6O60337 910 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 CCNT1O60563 726 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 GAS7O60861 476 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 GCFC2P16383 781 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 STAT5BP51692 787 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 ZNF200P98182 395 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 PTK7Q13308 1070 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 GNL2Q13823 731 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 LRCH2Q5VUJ6 765 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 ZNF746Q6NUN9 644 aaPredicted RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 CAGE1Q8TC20 777 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 TNPO1Q92973 898 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 LENG9Q96B70 501 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 RNPEPQ9H4A4 650 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 SAMM50Q9Y512 469 aa11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 MYH9P35579 1960 aaKnown RBP11.98□□□□□ -0.49
TRAPPC12-213ENST00000461577 PITPNM1O00562 1244 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 ATG7O95352 703 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 CCNE2O96020 404 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 PSAPP07602 524 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 CSF2RAP15509 400 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 PPFIA1Q13136 1202 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 EARS2Q5JPH6 523 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 PPP4R3AQ6IN85 833 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 ABHD15Q6UXT9 468 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 PLPPR4Q7Z2D5 763 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 SMAP1Q8IYB5 467 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 RPUSD2Q8IZ73 545 aaKnown RBP11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 SLC5A5Q92911 643 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 TNFRSF25Q93038 417 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 SCLYQ96I15 445 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 MBOAT7Q96N66 472 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 PCYT2Q99447 389 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 RIT2Q99578 217 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 IL23AQ9NPF7 189 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 ZNF302Q9NR11 478 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 SETD4Q9NVD3 440 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 SMC3Q9UQE7 1217 aa11.97□□□□□ -0.49
TRAPPC12-213ENST00000461577 TRPC6Q9Y210 931 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms