RNA–Protein interactions for RNA: ENST00000461409.1

HDAC9-220, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-220ENST00000461409 FAM160A2Q8N612 972 aaPredicted RBP10.06□□□□□ -0.8
HDAC9-220ENST00000461409 C7orf31Q8N865 590 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 PHOSPHO2Q8TCD6 241 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 VWCEQ96DN2 955 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 PDCD2LQ9BRP1 358 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 RIOX1Q9H6W3 641 aa10.06□□□□□ -0.8
HDAC9-220ENST00000461409 PNMA6FA0A0J9YX94 578 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 KIF28PB7ZC32 967 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 PPFIA4O75335 1185 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 F2P00734 622 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 MYCLP12524 364 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-220ENST00000461409 HOXD8P13378 290 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-220ENST00000461409 SELPP16109 830 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 IGFBP4P22692 258 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 HOXA13P31271 388 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-220ENST00000461409 KIF5BP33176 963 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 RABGGTBP53611 331 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 TROAPQ12815 778 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 GDF6Q6KF10 455 aaPredicted RBP10.05□□□□□ -0.8
HDAC9-220ENST00000461409 VSIG10LQ86VR7 867 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 ATXN2LQ8WWM7 1075 aaKnown RBP10.05□□□□□ -0.8
HDAC9-220ENST00000461409 KAT2BQ92831 832 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 HLA-CQ95604 372 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 PIGSQ96S52 555 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 MAP3K14Q99558 947 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 MTA3Q9BTC8 594 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 GTF2IRD1Q9UHL9 959 aa10.05□□□□□ -0.8
HDAC9-220ENST00000461409 TRIM66O15016 1216 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 STAM2O75886 525 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 DDAH1O94760 285 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 GGPS1O95749 300 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 CA3P07451 260 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 ZNF286BP0CG31 522 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 SSTR3P32745 418 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-220ENST00000461409 KCNJ6P48051 423 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 RBL2Q08999 1139 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 PTK7Q13308 1070 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 ADGRE1Q14246 886 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 PGM5Q15124 567 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 KIAA0753Q2KHM9 967 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 GNPTABQ3T906 1256 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 MSS51Q4VC12 460 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 PLA2G2CQ5R387 149 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 CELF3Q5SZQ8 465 aaKnown RBP10.04□□□□□ -0.8
HDAC9-220ENST00000461409 MYSM1Q5VVJ2 828 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 CASC1Q6TDU7 716 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 FCHSD1Q86WN1 690 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 HERC6Q8IVU3 1022 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 CTCFLQ8NI51 663 aaPredicted RBP10.04□□□□□ -0.8
HDAC9-220ENST00000461409 PPM1EQ8WY54 764 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 MAP4K1Q92918 833 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 SPATA33Q96N06 139 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 CTAGE1Q96RT6 745 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 LZTS2Q9BRK4 669 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 THEGQ9P2T0 379 aa10.04□□□□□ -0.8
HDAC9-220ENST00000461409 MYH6P13533 1939 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 HAS3O00219 553 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 NOP56O00567 594 aaKnown RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 CYTH3O43739 400 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 EFCAB14O75071 495 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 CKBP12277 381 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 MYOGP15173 224 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 UBA1P22314 1058 aaKnown RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 SLC19A1P41440 591 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 GNAQP50148 359 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 SLC35G1Q2M3R5 365 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 MB21D2Q8IYB1 491 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 TMTC2Q8N394 836 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 IL27Q8NEV9 243 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 IL31RAQ8NI17 732 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 CUL5Q93034 780 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 RRP36Q96EU6 259 aaKnown RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 ALG1Q9BT22 464 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 SPZ1Q9BXG8 430 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 TANC1Q9C0D5 1861 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 MLXIPQ9HAP2 919 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 SENP2Q9HC62 589 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 HDAC6Q9UBN7 1215 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 SEC63Q9UGP8 760 aaKnown RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
HDAC9-220ENST00000461409 FRMPD4Q14CM0 1322 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 EMSYQ7Z589 1322 aa10.03□□□□□ -0.8
HDAC9-220ENST00000461409 KIAA1217Q5T5P2 1943 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 ABHD14A-ACY1A0A1B0GW23 586 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 CXCL10P02778 98 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 CALM1P0DP23 149 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 CALM2P0DP24 149 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 CALM3P0DP25 149 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 SMARCA1P28370 1054 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 MCM5P33992 734 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 ANTXR2P58335 489 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 IRX6P78412 446 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-220ENST00000461409 MRPS5P82675 430 aaKnown RBP10.02□□□□□ -0.81
HDAC9-220ENST00000461409 NEDD9Q14511 834 aa10.02□□□□□ -0.81
HDAC9-220ENST00000461409 CCDC85BQ15834 202 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-220ENST00000461409 HSDL1Q3SXM5 330 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms