RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.57□□□□□ -1.2
MSH2-204ENST00000461394 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 AFG3L2Q9Y4W6 797 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 SAMM50Q9Y512 469 aa7.57□□□□□ -1.2
MSH2-204ENST00000461394 LOC285556D6RIA3 1793 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 IGLV3-22A0A075B6J6 115 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 NPHP3-ACAD11A0A0J9YXS1 232 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 N4BP3O15049 544 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 ZNF500O60304 480 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 KIF20AO95235 890 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 FGFR1OPO95684 399 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 FECHP22830 423 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 CCNE1P24864 410 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 RPA1P27694 616 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 HOXA7P31268 230 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 MTIF2P46199 727 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 OAZ1P54368 228 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 RPS6P62753 249 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 COASYQ13057 564 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PSMD2Q13200 908 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 MTMR1Q13613 665 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 BAATQ14032 418 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 CTTNQ14247 550 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 PGM5Q15124 567 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 SKIV2LQ15477 1246 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 PTPN21Q16825 1174 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 TKFCQ3LXA3 575 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 HERC4Q5GLZ8 1057 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 HYIQ5T013 277 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PCNX4Q63HM2 1172 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 NLRX1Q86UT6 975 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 CATSPER3Q86XQ3 398 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 VSTM4Q8IW00 320 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 LRRC8AQ8IWT6 810 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 ANKRD13AQ8IZ07 590 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 C17orf53Q8N3J3 647 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 CSGALNACT2Q8N6G5 542 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 CACTINQ8WUQ7 758 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 HPS3Q969F9 1004 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 WNK4Q96J92 1243 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 RMDN3Q96TC7 470 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PAGR1Q9BTK6 254 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 POLR3CQ9BUI4 534 aaPredicted RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 SRRTQ9BXP5 876 aaKnown RBP7.56□□□□□ -1.2
MSH2-204ENST00000461394 TEX13BQ9BXU2 312 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 VPS16Q9H269 839 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 HSD3B7Q9H2F3 369 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 UNC45AQ9H3U1 944 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 ACAD9Q9H845 621 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 TUFT1Q9NNX1 390 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 COL20A1Q9P218 1284 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 VAV3Q9UKW4 847 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PYCARDQ9ULZ3 195 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 MYH11P35749 1972 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 RLFQ13129 1914 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 PAPPA2Q9BXP8 1791 aa7.56□□□□□ -1.2
MSH2-204ENST00000461394 RPTORQ8N122 1335 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 KIAA1217Q5T5P2 1943 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 ARHGEF35A5YM69 484 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 GLTPD2A6NH11 291 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 IPO5O00410 1097 aaKnown RBP7.55□□□□□ -1.2
MSH2-204ENST00000461394 EML1O00423 815 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 FAM13AO94988 1023 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 EYA4O95677 639 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 SKILP12757 684 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 ZNF18P17022 549 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 COPB1P53618 953 aaKnown RBP7.55□□□□□ -1.2
MSH2-204ENST00000461394 PPATQ06203 517 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 STK4Q13043 487 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 PPP2R5CQ13362 524 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 NOLC1Q14978 699 aaKnown RBP eCLIP7.55□□□□□ -1.2
MSH2-204ENST00000461394 TMEM132BQ14DG7 1078 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 KRT31Q15323 416 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 LRRC41Q15345 812 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 EPHA7Q15375 998 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 TCP11X2Q5H9J9 407 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 FAM26FQ5R3K3 315 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 TREML2Q5T2D2 321 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 TMCO4Q5TGY1 634 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 CDKAL1Q5VV42 579 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 SPECC1LQ69YQ0 1117 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 MOB2Q70IA6 237 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 OTOP1Q7RTM1 612 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 NIPA1Q7RTP0 329 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 PNMA8AQ86V59 439 aaPredicted RBP7.55□□□□□ -1.2
MSH2-204ENST00000461394 NCAPG2Q86XI2 1143 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 ERO1BQ86YB8 467 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 MYOCDQ8IZQ8 938 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 ANKRD35Q8N283 1001 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 BANK1Q8NDB2 785 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 IL31RAQ8NI17 732 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 L3MBTL3Q96JM7 780 aaPredicted RBP7.55□□□□□ -1.2
MSH2-204ENST00000461394 CLMNQ96JQ2 1002 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 BHMT2Q9H2M3 363 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 THAP9Q9H5L6 903 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 JADE2Q9NQC1 790 aa7.55□□□□□ -1.2
MSH2-204ENST00000461394 PXMP2Q9NR77 195 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms