RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 NRDCO43847 1150 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 PPP1R11O60927 126 aaPredicted RBP4.2□□□□□ -1.74
VCL-203ENST00000461383 FBXO21O94952 628 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 LSP1P33241 339 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 RAB27AP51159 221 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 MCL1Q07820 350 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 TMEM132BQ14DG7 1078 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 FIGNQ5HY92 759 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 BROXQ5VW32 411 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 CPZQ66K79 652 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 HHIPL2Q6UWX4 724 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 PNMA8AQ86V59 439 aaPredicted RBP4.2□□□□□ -1.74
VCL-203ENST00000461383 DCP2Q8IU60 420 aaKnown RBP4.2□□□□□ -1.74
VCL-203ENST00000461383 RIOX2Q8IUF8 465 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 AMOTL1Q8IY63 956 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 RAVER1Q8IY67 606 aaKnown RBP4.2□□□□□ -1.74
VCL-203ENST00000461383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.2□□□□□ -1.74
VCL-203ENST00000461383 HOOK2Q96ED9 719 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 MTA3Q9BTC8 594 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 MENTQ9BUN1 341 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 SMURF1Q9HCE7 757 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 RIC8BQ9NVN3 520 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 ZIM2Q9NZV7 527 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 EBF1Q9UH73 591 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 DBR1Q9UK59 544 aaKnown RBP4.2□□□□□ -1.74
VCL-203ENST00000461383 NUDT5Q9UKK9 219 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 SRPK3Q9UPE1 567 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 FAN1Q9Y2M0 1017 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 SPO11Q9Y5K1 396 aa4.2□□□□□ -1.74
VCL-203ENST00000461383 SHTN1A0MZ66 631 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 PRAMEF25A6NGN4 478 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 MAN2B1O00754 1011 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 GABRDO14764 452 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 HGSO14964 777 aaPredicted RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 SLC27A2O14975 620 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 SNUPNO95149 360 aaKnown RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 MT-CO1P00395 513 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 AMY2AP04746 511 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 RNASE1P07998 156 aaKnown RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 AMY2BP19961 511 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 MVKQ03426 396 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 PIN1Q13526 163 aaPredicted RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 NFE2Q16621 373 aaPredicted RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 SLC23A3Q6PIS1 610 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 KCTD1Q719H9 257 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 TRIM48Q8IWZ4 208 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 ZZZ3Q8IYH5 903 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 CHPFQ8IZ52 775 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 CLRN3Q8NCR9 226 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 FLAD1Q8NFF5 587 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 UHMK1Q8TAS1 419 aaKnown RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 SEC14L1Q92503 715 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 TSR2Q969E8 191 aaKnown RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 ELF4Q99607 663 aaPredicted RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 PLCD4Q9BRC7 762 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 PCGF6Q9BYE7 350 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 KRTAP4-9Q9BYQ8 210 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 ACSS2Q9NR19 701 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 MBNL3Q9NUK0 354 aaKnown RBP4.19□□□□□ -1.74
VCL-203ENST00000461383 C14orf119Q9NWQ9 140 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 ZNF180Q9UJW8 692 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 ACSL6Q9UKU0 697 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 MRFAP1Q9Y605 127 aa4.19□□□□□ -1.74
VCL-203ENST00000461383 TCRBV5S4A2TA0A5A2 114 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 GOLGA8AA7E2F4 631 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 GOLGA8BA8MQT2 603 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 AKAP10O43572 662 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 TSPAN6O43657 245 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CLASP2O75122 1294 aaKnown RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 SCGB1D2O95969 90 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CFBP00751 764 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CYP17A1P05093 508 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 MSL3P1P0C860 447 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 ZBTB48P10074 688 aaPredicted RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 ATF3P18847 181 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CD40P25942 277 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 IARSP41252 1262 aaKnown RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 SLC6A11P48066 632 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CEBPAP49715 358 aaPredicted RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 SCAND1P57086 179 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 KLF1Q13351 362 aaPredicted RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 KIR3DS1Q14943 382 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 TERF2Q15554 542 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CLUL1Q15846 466 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 HABP4Q5JVS0 413 aaKnown RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 BTBD8Q5XKL5 378 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 CYP4F22Q6NT55 531 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 PGM2L1Q6PCE3 622 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 MILR1Q7Z6M3 343 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 NOSTRINQ8IVI9 506 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 SIRT2Q8IXJ6 389 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 LILRA2Q8N149 483 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 MYO1HQ8N1T3 1032 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 NETO2Q8NC67 525 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 BHLHE22Q8NFJ8 381 aaPredicted RBP4.18□□□□□ -1.74
VCL-203ENST00000461383 PHOSPHO1Q8TCT1 267 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 SMOC1Q9H4F8 434 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 C19orf44Q9H6X5 657 aa4.18□□□□□ -1.74
VCL-203ENST00000461383 RC3H2Q9HBD1 1191 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms