RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 SYN1P17600 705 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PTGS1P23219 599 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 ARHGAP4P98171 946 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PTPN11Q06124 597 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 CEP55Q53EZ4 464 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 DAGLBQ8NCG7 672 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PGBD1Q96JS3 809 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 SDF4Q9BRK5 362 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 JADE2Q9NQC1 790 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PDLIM7Q9NR12 457 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 TMEM39AQ9NV64 488 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 TMEM260Q9NX78 707 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PLA2G2EQ9NZK7 142 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 ORC3Q9UBD5 711 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 ZNF215Q9UL58 517 aaPredicted RBP11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PCDHGA10Q9Y5H3 936 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 UBIAD1Q9Y5Z9 338 aa11.79□□□□□ -0.52
HLA-DQB1-207ENST00000460185 PPFIA4O75335 1185 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 SUPT20HL2P0C7V6 817 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 RAG1P15918 1043 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 CHMP4BP1P59074 171 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 CYFIP1Q7L576 1253 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 NIPA1Q7RTP0 329 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 FAM126BQ8IXS8 530 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 BLIDQ8IZY5 108 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 NECAB1Q8N987 351 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 TBC1D32Q96NH3 1257 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 MXRA8Q9BRK3 442 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 LLPHQ9BRT6 129 aaKnown RBP11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 ALG1Q9BT22 464 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
HLA-DQB1-207ENST00000460185 CCDC194A0A1B0GVG4 234 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 A0A1W2PPC1 479 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 BHMG1C9JSJ3 638 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KIAA0355O15063 1070 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 LARGE1O95461 756 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 F2P00734 622 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CYP3A4P08684 503 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ZNF286BP0CG31 522 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HOXD8P13378 290 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ITGB5P18084 799 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MCM2P49736 904 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CDK7P50613 346 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PSMC6P62333 389 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HMGN5P82970 282 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CAMK2BQ13554 666 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HSDL1Q3SXM5 330 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KRT25Q7Z3Z0 450 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CCDC155Q8N6L0 562 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 C7orf31Q8N865 590 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SLC43A3Q8NBI5 491 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NSUN7Q8NE18 718 aaKnown RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 JPH1Q9HDC5 661 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KCNH7Q9NS40 1196 aa11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRIP12Q14669 1992 aaPredicted RBP11.77□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRIOBPQ9H2D6 2365 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SORBS3O60504 671 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KCNA2P16389 499 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MAGEA10P43363 369 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SP2Q02086 613 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SP4Q02446 784 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FAAP100Q0VG06 881 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SEMA3FQ13275 785 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NONOQ15233 471 aaKnown RBP eCLIP11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PLA2G4DQ86XP0 818 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CCDC83Q8IWF9 413 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RASGRP4Q8TDF6 673 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 AIFM3Q96NN9 605 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KIF2CQ99661 725 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NAP1L4Q99733 375 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PHF20Q9BVI0 1012 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 UBE2OQ9C0C9 1292 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PKD2L1Q9P0L9 805 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SLC9A2Q9UBY0 812 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TBX21Q9UL17 535 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NFASCO94856 1347 aa11.76□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 H3BRB1 525 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MEIS1O00470 390 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 DPYSL4O14531 572 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 B4GALT4O60513 344 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CTDNEP1O95476 244 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 LGALS2P05162 132 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 BMP8BP34820 402 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KRT2P35908 639 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 USP11P51784 963 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MDM2Q00987 491 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SAFBQ15424 915 aaKnown RBP eCLIP11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KIAA0753Q2KHM9 967 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SESTD1Q86VW0 696 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TBCKQ8TEA7 893 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TNPO1Q92973 898 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GPR20Q99678 358 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GDF15Q99988 308 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms