RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 KCNQ2O43526 872 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 MAN1A1P33908 653 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 PHBP35232 272 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 CACNB3P54284 484 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 SNAP25P60880 206 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 SLC7A5Q01650 507 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 NAA25Q14CX7 972 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 CASC4Q6P4E1 433 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 CCDC62Q6P9F0 684 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 SLC7A3Q8WY07 619 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 TRIM11Q96F44 468 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 PCDHA6Q9UN73 950 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 PTPN22Q9Y2R2 807 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 PCDHA8Q9Y5H6 950 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 A0A0G2JLW4 131 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 A0A1B0GUA9 196 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 I3L4J1 428 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 HSPA1LP34931 641 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 PLTPP55058 493 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 BFSP1Q12934 665 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 TERF2Q15554 542 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 MAP7D1Q3KQU3 841 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 ALS2CLQ60I27 953 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 EMBQ6PCB8 327 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 ZNF408Q9H9D4 720 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 BUB1BO60566 1050 aaPredicted RBP16.04■□□□□ 0.16
PTPRU-205ENST00000460170 RAD17O75943 681 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 MAPK4P31152 587 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 ANKRD20A3Q5VUR7 823 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 TTC16Q8NEE8 873 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 WHAMMQ8TF30 809 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 BAIAP2L1Q9UHR4 511 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 ATP8A1Q9Y2Q0 1164 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 FAM205CA6NFA0 338 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 LRRC53A6NM62 1247 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 CRKP46108 304 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 E4F1Q66K89 784 aaPredicted RBP16.04■□□□□ 0.16
PTPRU-205ENST00000460170 GUF1Q8N442 669 aaKnown RBP16.04■□□□□ 0.16
PTPRU-205ENST00000460170 A0A1W2PQC6 194 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 E9PMD0 336 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 USP14P54578 494 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 MASTLQ96GX5 879 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 FAM81BQ96LP2 452 aa16.04■□□□□ 0.16
PTPRU-205ENST00000460170 EPB41L4AQ9HCS5 686 aaPredicted RBP16.04■□□□□ 0.16
PTPRU-205ENST00000460170 USP17L10C9JJH3 530 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 ADRA2BP18089 450 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
PTPRU-205ENST00000460170 KCNB1Q14721 858 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 CCDC110Q8TBZ0 833 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 ARHGEF2Q92974 986 aaKnown RBP16.03■□□□□ 0.16
PTPRU-205ENST00000460170 PCDHB4Q9Y5E5 795 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 SRGAP2O75044 1071 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 MMP10P09238 476 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 DHX9Q08211 1270 aaKnown RBP16.03■□□□□ 0.16
PTPRU-205ENST00000460170 COASYQ13057 564 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
PTPRU-205ENST00000460170 ALCAMQ13740 583 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 FAM160B1Q5W0V3 765 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 SFI1A8K8P3 1242 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 RNF8O76064 485 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 GRM1Q13255 1194 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 KAZNQ674X7 775 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 CDHR1Q96JP9 859 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 MIS12Q9H081 205 aa16.03■□□□□ 0.16
PTPRU-205ENST00000460170 TROVE2P10155 538 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTPRU-205ENST00000460170 LMNB2Q03252 620 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTPRU-205ENST00000460170 SFR1Q86XK3 245 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 ENGASEQ8NFI3 743 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 INTS9Q9NV88 658 aaKnown RBP16.02■□□□□ 0.16
PTPRU-205ENST00000460170 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 VWDEQ8N2E2 1590 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 CD163L1Q9NR16 1453 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 NNTQ13423 1086 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 SCYL2Q6P3W7 929 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 PIGOQ8TEQ8 1089 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 ADPGKQ9BRR6 497 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 CCSER1Q9C0I3 900 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 SENP2Q9HC62 589 aa16.02■□□□□ 0.16
PTPRU-205ENST00000460170 A0A1B0GTH6 734 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 ARHGAP4P98171 946 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 KRT81Q14533 505 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 CAPN12Q6ZSI9 719 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 NCAPG2Q86XI2 1143 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 ARHGAP24Q8N264 748 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 HPS5Q9UPZ3 1129 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 PCK1P35558 622 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 RASSF2P50749 326 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 PODNQ7Z5L7 613 aa16.02■□□□□ 0.15
PTPRU-205ENST00000460170 RRP15Q9Y3B9 282 aaKnown RBP16.02■□□□□ 0.15
PTPRU-205ENST00000460170 MTF1Q14872 753 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 SBK1Q52WX2 424 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 GLE1Q53GS7 698 aaKnown RBP16.01■□□□□ 0.15
PTPRU-205ENST00000460170 SGO2Q562F6 1265 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 MIGA2Q7L4E1 593 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 VPS52Q8N1B4 723 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 MMS19Q96T76 1030 aa16.01■□□□□ 0.15
PTPRU-205ENST00000460170 MRFAP1Q9Y605 127 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms