RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 PCDHA8Q9Y5H6 950 aa10.1□□□□□ -0.79
PKP4-207ENST00000457109 TAF6LQ9Y6J9 622 aa10.1□□□□□ -0.79
PKP4-207ENST00000457109 FRMPD4Q14CM0 1322 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 ARHGEF15O94989 841 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 HMGB1P09429 215 aaKnown RBP10.09□□□□□ -0.79
PKP4-207ENST00000457109 MARK3P27448 753 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 IGBP1P78318 339 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
PKP4-207ENST00000457109 GPM6BQ13491 265 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 HIC1Q14526 733 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
PKP4-207ENST00000457109 MICU3Q86XE3 530 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 TEX2Q8IWB9 1127 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 FIBCD1Q8N539 461 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 LMBR1Q8WVP7 490 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
PKP4-207ENST00000457109 JADE2Q9NQC1 790 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 TCEAL9Q9UHQ7 104 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 TRPC6Q9Y210 931 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 RWDD3Q9Y3V2 267 aa10.09□□□□□ -0.79
PKP4-207ENST00000457109 SCN10AQ9Y5Y9 1956 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 CCDC196A0A1B0GTZ2 297 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 hCG_1642624A0A1W2PR95 340 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 ZBTB43O43298 467 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 NCK2O43639 380 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 LPXNO60711 386 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 ATP9AO75110 1047 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 GHRP10912 638 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 HOXC8P31273 242 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 ADCY7P51828 1080 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 SEMA3FQ13275 785 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 NECTIN1Q15223 517 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 GRIK4Q16099 956 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 UBE2SQ16763 222 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 RTN1Q16799 776 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 EPC2Q52LR7 807 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 TIGD5Q53EQ6 642 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 FAM26DQ5JW98 314 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 MCTP2Q6DN12 878 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 TMTC3Q6ZXV5 915 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 DHX32Q7L7V1 743 aaKnown RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 RAB11FIP4Q86YS3 637 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 TMEM192Q8IY95 271 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 MRPL38Q96DV4 380 aaKnown RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 NECAB3Q96P71 396 aaPredicted RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 MXRA8Q9BRK3 442 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 C17orf80Q9BSJ5 609 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 UBE2ZQ9H832 354 aaPredicted RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 JPH1Q9HDC5 661 aaPredicted RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 RNF216Q9NWF9 866 aaPredicted RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 SLC9A2Q9UBY0 812 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 TUBE1Q9UJT0 475 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 UBIAD1Q9Y5Z9 338 aa10.08□□□□□ -0.8
PKP4-207ENST00000457109 V9GY48 417 aaPredicted RBP10.08□□□□□ -0.8
PKP4-207ENST00000457109 GSTTP1A0A1W2PQM5 241 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 SMCO2A6NFE2 343 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 H3BNC9 293 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 hCG_1984214I3L0E3 225 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 BACH1O14867 736 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 RB1P06400 928 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 STAG3L1P0CL83 205 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 KCNA2P16389 499 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 ITGB5P18084 799 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 KCNA5P22460 613 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 SSTR3P32745 418 aaPredicted RBP10.07□□□□□ -0.8
PKP4-207ENST00000457109 STAT5BP51692 787 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 AKAP17AQ02040 695 aaKnown RBP10.07□□□□□ -0.8
PKP4-207ENST00000457109 ODR4Q5SWX8 454 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 FAM160B1Q5W0V3 765 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 PPP1R18Q6NYC8 613 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 RPAINQ86UA6 219 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 SGMS1Q86VZ5 419 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 NME8Q8N427 588 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 ZNF713Q8N859 430 aaPredicted RBP10.07□□□□□ -0.8
PKP4-207ENST00000457109 BANK1Q8NDB2 785 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 CCDC12Q8WUD4 166 aaPredicted RBP10.07□□□□□ -0.8
PKP4-207ENST00000457109 DNAJB3Q8WWF6 145 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 PPP2R3CQ969Q6 453 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 FTHL17Q9BXU8 183 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 RIC8AQ9NPQ8 531 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 KCNH7Q9NS40 1196 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 LRFN2Q9ULH4 789 aa10.07□□□□□ -0.8
PKP4-207ENST00000457109 PRUNE2Q8WUY3 3088 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 GOLGA8AA7E2F4 631 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 GOLGA8BA8MQT2 603 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 ENPP3O14638 875 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 CHRNA1P02708 482 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 INSRRP14616 1297 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 CTNNB1P35222 781 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 SLC26A2P50443 739 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 ADAM17P78536 824 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 BTG3Q14201 252 aaPredicted RBP10.06□□□□□ -0.8
PKP4-207ENST00000457109 CEP55Q53EZ4 464 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 BMP2KLQ5H9B9 411 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 TSHZ1Q6ZSZ6 1077 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 FAM43BQ6ZT52 329 aaPredicted RBP10.06□□□□□ -0.8
PKP4-207ENST00000457109 CENPQQ7L2Z9 268 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms