RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ZNF746Q6NUN9 644 aaPredicted RBP12.26□□□□□ -0.45
DDR1-240ENST00000454612 PEX26Q7Z412 305 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 NEDD1Q8NHV4 660 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 GOLGA5Q8TBA6 731 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 SCLT1Q96NL6 688 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 SELENOSQ9BQE4 189 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 SLC24A3Q9HC58 644 aa12.26□□□□□ -0.45
DDR1-240ENST00000454612 MYH14Q7Z406 1995 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 NDUFAB1O14561 156 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 EPHB6O15197 1021 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 PALMO75781 387 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 TRIM49P0CI25 452 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 TRIM49CP0CI26 452 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 EPB41P11171 864 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 COASYQ13057 564 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 MAN2A1Q16706 1144 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 AOC3Q16853 763 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 FLAD1Q8NFF5 587 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 HDAC7Q8WUI4 952 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 DYDC1Q8WWB3 177 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 MTMR4Q9NYA4 1195 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 CAPN6Q9Y6Q1 641 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 RCCD1A6NED2 376 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 ZSCAN5CA6NGD5 496 aaPredicted RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 ZBTB39O15060 712 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 HEXIM1O94992 359 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 GNGT1P63211 74 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 FUT2Q10981 343 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 CEP85LQ5SZL2 805 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 OTUD6BQ8N6M0 293 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 TRIM58Q8NG06 486 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 ANO3Q9BYT9 981 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 CPSF2Q9P2I0 782 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 CEP83Q9Y592 693 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 COL4A3BPQ9Y5P4 624 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 ARHGEF35A5YM69 484 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 RSPH10B2B2RC85 870 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 RSPH10BP0C881 870 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 COPB2P35606 906 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 EXOC3L4Q17RC7 722 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 ODR4Q5SWX8 454 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 BCAS4Q8TDM0 211 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 PAIP2Q9BPZ3 127 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 TCHPQ9BT92 498 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 LRRC27Q9C0I9 530 aa12.25□□□□□ -0.45
DDR1-240ENST00000454612 DDX4Q9NQI0 724 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 LIMA1Q9UHB6 759 aaKnown RBP12.25□□□□□ -0.45
DDR1-240ENST00000454612 TESPA1A2RU30 521 aaPredicted RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 H0YIN7 160 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 CCDC172P0C7W6 258 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 PCP11498 1178 aaKnown RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 KRT5P13647 590 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 SLC9A1P19634 815 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 TNFAIP3P21580 790 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 ZNF211Q13398 564 aaPredicted RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 CTTNBP2NLQ9P2B4 639 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDR1-240ENST00000454612 F5H6K3 240 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 NMT1P30419 496 aaKnown RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 CRKP46108 304 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 KLRC3Q07444 240 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 NAALADL2Q58DX5 795 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 FAM83BQ5T0W9 1011 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 PRAMEF18Q5VWM3 479 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 CAPN12Q6ZSI9 719 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 TMEM139Q8IV31 216 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 NLGN1Q8N2Q7 840 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 SEMA6BQ9H3T3 888 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 THAP9Q9H5L6 903 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 C4AP0C0L4 1744 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 C4BP0C0L5 1744 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 DLATP10515 647 aaKnown RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 PDE6BP35913 854 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 CFAP221Q4G0U5 840 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 ZC2HC1CQ53FD0 456 aaPredicted RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 DDX42Q86XP3 938 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDR1-240ENST00000454612 ZNF668Q96K58 619 aaPredicted RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 JMJD4Q9H9V9 463 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 DMGDHQ9UI17 866 aaKnown RBP12.24□□□□□ -0.45
DDR1-240ENST00000454612 ANAPC4Q9UJX5 808 aa12.24□□□□□ -0.45
DDR1-240ENST00000454612 PNMA6FA0A0J9YX94 578 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 GYS1P13807 737 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 MCM3P25205 808 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 PSMC6P62333 389 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 KCNH2Q12809 1159 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 CDKAL1Q5VV42 579 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 HAUS3Q68CZ6 603 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
DDR1-240ENST00000454612 FAM178BQ8IXR5 827 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 PACSIN1Q9BY11 444 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 PTPN22Q9Y2R2 807 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 FAM237AA0A1B0GTK4 181 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 BBOX1O75936 387 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 ACTN2P35609 894 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 CLNS1AP54105 237 aaKnown RBP12.23□□□□□ -0.45
DDR1-240ENST00000454612 BIRC2Q13490 618 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 MGARPQ8TDB4 240 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 SELENOOQ9BVL4 669 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 FUT8Q9BYC5 575 aa12.23□□□□□ -0.45
DDR1-240ENST00000454612 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms