RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 RBM19Q9Y4C8 960 aaKnown RBP16.65■□□□□ 0.26
VPS16-205ENST00000453689 TET1Q8NFU7 2136 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 SIP14410 1827 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 GSTTP1A0A1W2PQM5 241 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 CYP2C9P11712 490 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 CIITAP33076 1130 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 CYP2C18P33260 490 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 TCF7P36402 384 aaPredicted RBP16.64■□□□□ 0.25
VPS16-205ENST00000453689 FOSBP53539 338 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.25
VPS16-205ENST00000453689 MFSD5Q6N075 450 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 TDHQ8IZJ6 230 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 C7orf31Q8N865 590 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 TBCKQ8TEA7 893 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 CTAGE1Q96RT6 745 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 SDF4Q9BRK5 362 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 NOC4LQ9BVI4 516 aaKnown RBP16.64■□□□□ 0.25
VPS16-205ENST00000453689 JPH1Q9HDC5 661 aaPredicted RBP16.64■□□□□ 0.25
VPS16-205ENST00000453689 SLC9A2Q9UBY0 812 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 GTF2IRD1Q9UHL9 959 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 UMODL1Q5DID0 1318 aa16.64■□□□□ 0.25
VPS16-205ENST00000453689 USP11P51784 963 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 SETQ01105 290 aaPredicted RBP16.63■□□□□ 0.25
VPS16-205ENST00000453689 FPGSQ05932 587 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 PTGISQ16647 500 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 PRR16Q569H4 304 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 KRT40Q6A162 431 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 SEPT1Q8WYJ6 367 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 LENG9Q96B70 501 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
VPS16-205ENST00000453689 RANBP2P49792 3224 aaKnown RBP16.62■□□□□ 0.25
VPS16-205ENST00000453689 PDCP20941 246 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 EPHB4P54760 987 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 NONOQ15233 471 aaKnown RBP eCLIP16.62■□□□□ 0.25
VPS16-205ENST00000453689 KRT25Q7Z3Z0 450 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 FBXO18Q8NFZ0 1043 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 OXER1Q8TDS5 423 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 BRMS1Q9HCU9 246 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 ZNF215Q9UL58 517 aaPredicted RBP16.62■□□□□ 0.25
VPS16-205ENST00000453689 NOD1Q9Y239 953 aa16.62■□□□□ 0.25
VPS16-205ENST00000453689 PTPRSQ13332 1948 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 DDX39AO00148 427 aaKnown RBP16.61■□□□□ 0.25
VPS16-205ENST00000453689 IPO5O00410 1097 aaKnown RBP16.61■□□□□ 0.25
VPS16-205ENST00000453689 DHX15O43143 795 aaKnown RBP16.61■□□□□ 0.25
VPS16-205ENST00000453689 MMP1P03956 469 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 CSF2RAP15509 400 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 KRT2P35908 639 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 CCL23P55773 120 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 ACTR2P61160 394 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 HIC1Q14526 733 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 SAFBQ15424 915 aaKnown RBP eCLIP16.61■□□□□ 0.25
VPS16-205ENST00000453689 LARP1BQ659C4 914 aaKnown RBP16.61■□□□□ 0.25
VPS16-205ENST00000453689 TMEM199Q8N511 208 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 SPRYD3Q8NCJ5 442 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 EMSYQ7Z589 1322 aa16.61■□□□□ 0.25
VPS16-205ENST00000453689 CCDC194A0A1B0GVG4 234 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 H3BQV1 296 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 LGR5O75473 907 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 TDP2O95551 362 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 CCNE2O96020 404 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 SMIM10L2AP0DMW4 78 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 SMIM10L2BP0DMW5 78 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 HOXC8P31273 242 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 ZNF200P98182 395 aaPredicted RBP16.6■□□□□ 0.25
VPS16-205ENST00000453689 PPIGQ13427 754 aaKnown RBP eCLIP16.6■□□□□ 0.251e-6■■■□□ 16.4
VPS16-205ENST00000453689 SHHQ15465 462 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 INF2Q27J81 1249 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 C9orf50Q5SZB4 431 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 DHX38Q92620 1227 aaKnown RBP16.6■□□□□ 0.25
VPS16-205ENST00000453689 PCYT2Q99447 389 aa16.6■□□□□ 0.25
VPS16-205ENST00000453689 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 ATG7O95352 703 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 CYP3A7P24462 503 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
VPS16-205ENST00000453689 NR5A1Q13285 461 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
VPS16-205ENST00000453689 DIS3L2Q8IYB7 885 aaKnown RBP16.59■□□□□ 0.25
VPS16-205ENST00000453689 GLG1Q92896 1179 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 SCLYQ96I15 445 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 MBOAT7Q96N66 472 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 RNPEPQ9H4A4 650 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 SMARCAD1Q9H4L7 1026 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 TBC1D22BQ9NU19 505 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 ERAP1Q9NZ08 941 aa16.59■□□□□ 0.25
VPS16-205ENST00000453689 MICAL3Q7RTP6 2002 aa16.58■□□□□ 0.25
VPS16-205ENST00000453689 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 FAM205CA6NFA0 338 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 PITPNM1O00562 1244 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 MSH4O15457 936 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 MARK3P27448 753 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 PTK7Q13308 1070 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 BFSP2Q13515 415 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 Q4G0T1 1027 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 MOXD1Q6UVY6 613 aa16.58■□□□□ 0.24
VPS16-205ENST00000453689 ABHD15Q6UXT9 468 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms