RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 LMF1Q96S06 567 aa3.88□□□□□ -1.79
LRCH3-209ENST00000452660 ACBD3Q9H3P7 528 aa3.88□□□□□ -1.79
LRCH3-209ENST00000452660 ZDHHC9Q9Y397 364 aa3.88□□□□□ -1.79
LRCH3-209ENST00000452660 IQCA1LA6NCM1 817 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 ZNF839A8K0R7 811 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 H0Y858 1186 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 DDAH1O94760 285 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 FGFR1P11362 822 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 POLD1P28340 1107 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 TGFB2P61812 414 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 PPP2R2AP63151 447 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 GNL2Q13823 731 aaKnown RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 HSP90AA2PQ14568 343 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 USP10Q14694 798 aaKnown RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 ZNF568Q3ZCX4 644 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 SPDYAQ5MJ70 313 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 CD276Q5ZPR3 534 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 LARP1BQ659C4 914 aaKnown RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 MRM1Q6IN84 353 aaKnown RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 TCTN3Q6NUS6 607 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 TMC5Q6UXY8 1006 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 LBX2Q6XYB7 198 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 RNF207Q6ZRF8 634 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 CLEC4DQ8WXI8 215 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 ZNF669Q96BR6 464 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 MRRFQ96E11 262 aaKnown RBP3.87□□□□□ -1.79
LRCH3-209ENST00000452660 SCYL1Q96KG9 808 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 CARD11Q9BXL7 1154 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 ARHGAP20Q9P2F6 1191 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 SLC30A1Q9Y6M5 507 aa3.87□□□□□ -1.79
LRCH3-209ENST00000452660 DLX3O60479 287 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 COMTP21964 271 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 GRK2P25098 689 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 GRK3P35626 688 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 TUSC3Q13454 348 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 SKIDA1Q1XH10 827 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 ZMAT1Q5H9K5 638 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 CXXC5Q7LFL8 322 aaKnown RBP3.86□□□□□ -1.79
LRCH3-209ENST00000452660 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-209ENST00000452660 ZFPM1Q8IX07 1006 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 PALM2Q8IXS6 379 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 PIP4K2CQ8TBX8 421 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 MICAL1Q8TDZ2 1067 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 ZNF503Q96F45 646 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 LGR4Q9BXB1 951 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 AURKAIP1Q9NWT8 199 aaPredicted RBP3.86□□□□□ -1.79
LRCH3-209ENST00000452660 ZFP69BQ9UJL9 534 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 FBXO10Q9UK96 956 aa3.86□□□□□ -1.79
LRCH3-209ENST00000452660 ZFR2Q9UPR6 939 aaKnown RBP3.86□□□□□ -1.79
LRCH3-209ENST00000452660 WDR33Q9C0J8 1336 aaKnown RBP3.86□□□□□ -1.79
LRCH3-209ENST00000452660 A0A1W2PQU0 124 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 PMS2P1A4D2B8 440 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 FAM47E-STBD1D6RA91 191 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 WNT9AO14904 365 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 SLC27A2O14975 620 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 FOXS1O43638 330 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 RAD17O75943 681 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 CKMP06732 381 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 RAC3P60763 192 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 GPR85P60893 370 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 ABHD18Q0P651 414 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 TOP3AQ13472 1001 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-209ENST00000452660 NFYCQ13952 458 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 STYK1Q6J9G0 422 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 KCTD1Q719H9 257 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 POLNQ7Z5Q5 900 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 IFNL3Q8IZI9 196 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 NLGN4XQ8N0W4 816 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 ST13P5Q8NFI4 369 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-209ENST00000452660 NEIL1Q96FI4 390 aaPredicted RBP3.85□□□□□ -1.79
LRCH3-209ENST00000452660 PTPN18Q99952 460 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 PHF20Q9BVI0 1012 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 DSEQ9UL01 958 aa3.85□□□□□ -1.79
LRCH3-209ENST00000452660 B2RBV5 119 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 GJB6O95452 261 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 GNAT1P11488 350 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 RPS19P39019 145 aaKnown RBP3.84□□□□□ -1.79
LRCH3-209ENST00000452660 ETV4P43268 484 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 PFKPQ01813 784 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 MAMDC4Q6UXC1 1216 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 GIMAP8Q8ND71 665 aaPredicted RBP3.84□□□□□ -1.79
LRCH3-209ENST00000452660 FAM89AQ96GI7 184 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 AARSD1Q9BTE6 412 aaKnown RBP3.84□□□□□ -1.79
LRCH3-209ENST00000452660 IER2Q9BTL4 223 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 JAM3Q9BX67 310 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 KIAA1522Q9P206 1035 aaPredicted RBP3.84□□□□□ -1.79
LRCH3-209ENST00000452660 HS3ST3A1Q9Y663 406 aa3.84□□□□□ -1.79
LRCH3-209ENST00000452660 MSCO60682 206 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 FGRP09769 529 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 NAT1P18440 290 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 CR2P20023 1033 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 MCM7P33993 719 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 GJA4P35212 333 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 DPTQ07507 201 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 DBPQ10586 325 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-209ENST00000452660 KLF10Q13118 480 aa3.83□□□□□ -1.8
LRCH3-209ENST00000452660 SMN1Q16637 294 aaKnown RBP3.83□□□□□ -1.8
LRCH3-209ENST00000452660 CRB2Q5IJ48 1285 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms