RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 MMP10P09238 476 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 MRPS25P82663 173 aaKnown RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 DHX9Q08211 1270 aaKnown RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 SDCCAG8Q86SQ7 713 aaPredicted RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 SRBD1Q8N5C6 995 aaKnown RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 PIGOQ8TEQ8 1089 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 KCNF1Q9H3M0 494 aa11.31□□□□□ -0.6
CTC1-202ENST00000449476 INTS9Q9NV88 658 aaKnown RBP11.31□□□□□ -0.6
CTC1-202ENST00000449476 E9PMD0 336 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 KCNQ2O43526 872 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 SRGAP2O75044 1071 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 KRT27Q7Z3Y8 459 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 ARHGAP24Q8N264 748 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 HESX1Q9UBX0 185 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 ANAPC4Q9UJX5 808 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 DIP2CQ9Y2E4 1556 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 FAM196BA6NMK8 535 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 ANTXR2P58335 489 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 GADL1Q6ZQY3 521 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 SPATA24Q86W54 205 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 SEPT12Q8IYM1 358 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 PROM2Q8N271 834 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 STAG2Q8N3U4 1231 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 SMC1BQ8NDV3 1235 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 ARHGEF1Q92888 912 aaKnown RBP11.3□□□□□ -0.6
CTC1-202ENST00000449476 PCDHA6Q9UN73 950 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 STK38LQ9Y2H1 464 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 TTLL3Q9Y4R7 772 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 PCDHA8Q9Y5H6 950 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 FDPSP14324 419 aaKnown RBP11.3□□□□□ -0.6
CTC1-202ENST00000449476 FAM160B2Q86V87 743 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
CTC1-202ENST00000449476 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 LRRC53A6NM62 1247 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 USP17L10C9JJH3 530 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 EIF2AK2P19525 551 aaKnown RBP11.29□□□□□ -0.6
CTC1-202ENST00000449476 RASSF2P50749 326 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
CTC1-202ENST00000449476 SGO2Q562F6 1265 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 FAM160B1Q5W0V3 765 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CC2D1AQ6P1N0 951 aaPredicted RBP11.29□□□□□ -0.6
CTC1-202ENST00000449476 NEDD1Q8NHV4 660 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 ATP2A3Q93084 1043 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 TRIM11Q96F44 468 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 HSPA6P17066 643 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CRKP46108 304 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 SFR1Q86XK3 245 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 RAD54LQ92698 747 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 NSUN4Q96CB9 384 aaKnown RBP11.29□□□□□ -0.6
CTC1-202ENST00000449476 RILPQ96NA2 401 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 AP1M1Q9BXS5 423 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 MAN1A1P33908 653 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 NNTQ13423 1086 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 SNX1Q13596 522 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 EMBQ6PCB8 327 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 DCAF4Q8WV16 495 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 PPP1R12CQ9BZL4 782 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 MIS12Q9H081 205 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 A0A0G2JLW4 131 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 ANO9A1A5B4 782 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 USP14P54578 494 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 LMNB2Q03252 620 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 TERF2Q15554 542 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 C12orf60Q5U649 245 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 LMNTD2Q8IXW0 634 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 GABPB2Q8TAK5 448 aaPredicted RBP11.29□□□□□ -0.6
CTC1-202ENST00000449476 WHAMMQ8TF30 809 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CDHR1Q96JP9 859 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 CEP72Q9P209 647 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 NFU1Q9UMS0 254 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 ADAMTS13Q76LX8 1427 aa11.29□□□□□ -0.6
CTC1-202ENST00000449476 POTEB3A0JP26 581 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 POTECB2RU33 542 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 POC1B-GALNT4F8VUJ3 575 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 IGBP1P78318 339 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 SARNPP82979 210 aaKnown RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 ARHGAP4P98171 946 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 IFT88Q13099 833 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 MTF1Q14872 753 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 POTEBQ6S5H4 581 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 GUF1Q8N442 669 aaKnown RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 MASTLQ96GX5 879 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 MXD3Q9BW11 206 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 EPC1Q9H2F5 836 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 RRP15Q9Y3B9 282 aaKnown RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 INO80B-WBP1J3KQ70 363 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 TDP2O95551 362 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ECEL1O95672 775 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 CLNS1AP54105 237 aaKnown RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 KCNH2Q12809 1159 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 COASYQ13057 564 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ORC2Q13416 577 aaPredicted RBP11.28□□□□□ -0.6
CTC1-202ENST00000449476 ALS2CLQ60I27 953 aa11.28□□□□□ -0.6
CTC1-202ENST00000449476 ZNF34Q8IZ26 560 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms