RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 RFC2P35250 354 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 TCF7P36402 384 aaPredicted RBP16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 UTP14CQ5TAP6 766 aaKnown RBP16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 FAM177A1Q8N128 213 aaPredicted RBP16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 RETREG2Q8NC44 543 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 AFAP1L1Q8TED9 768 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 PKD2L1Q9P0L9 805 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 NOD1Q9Y239 953 aa16.05■□□□□ 0.16
RTFDC1-204ENST00000449062 GRXCR1A8MXD5 290 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 RBAK-RBAKDNI3L0D1 243 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 CPLX1O14810 134 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 TREHO43280 583 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 CCNE2O96020 404 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 PFKMP08237 780 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SELPP16109 830 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SP4Q02446 784 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 MBTPS1Q14703 1052 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 ANKRD1Q15327 319 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 ME3Q16798 604 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 OTOP2Q7RTS6 562 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 TRIM22Q8IYM9 498 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 CCDC148Q8NFR7 591 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 BICD2Q8TD16 824 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 LENG9Q96B70 501 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 KIF2CQ99661 725 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SLKQ9H2G2 1235 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 TTYH1Q9H313 450 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SEMA6BQ9H3T3 888 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 JPH1Q9HDC5 661 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SETD4Q9NVD3 440 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 SLC9A2Q9UBY0 812 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 COL6A3P12111 3177 aa16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 TRIP12Q14669 1992 aaPredicted RBP16.04■□□□□ 0.16
RTFDC1-204ENST00000449062 IGKV6D-21A0A0A0MT36 114 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 C17orf102A2RUQ5 167 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 DTNBO60941 627 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 LARGE1O95461 756 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 CXCL10P02778 98 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 FDPSP14324 419 aaKnown RBP16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 NEK4P51957 841 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 ACTR2P61160 394 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 ZNF618Q5T7W0 954 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 DEFB128Q7Z7B8 93 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 PLA2G4DQ86XP0 818 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 DAGLBQ8NCG7 672 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 PCDHA4Q9UN74 947 aa16.03■□□□□ 0.16
RTFDC1-204ENST00000449062 MYO9BQ13459 2157 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 DOCK5Q9H7D0 1870 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 NBNO60934 754 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 ZNF76P36508 570 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 USP11P51784 963 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 NLRP5P59047 1200 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 TCTN1Q2MV58 587 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 MARCH8Q5T0T0 291 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 CPLX2Q6PUV4 134 aaKnown RBP16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 ABHD15Q6UXT9 468 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 LRRC8DQ7L1W4 858 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 ATP6V0A1Q93050 837 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 GUCD1Q96NT3 240 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 SMARCAD1Q9H4L7 1026 aa16.02■□□□□ 0.16
RTFDC1-204ENST00000449062 CDH23Q9H251 3354 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 EMSYQ7Z589 1322 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 NRCAMQ92823 1304 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 STK36Q9NRP7 1315 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 IPO5O00410 1097 aaKnown RBP16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 PBX2P40425 430 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 GALNT17Q6IS24 598 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 PLPPR4Q7Z2D5 763 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 BLIDQ8IZY5 108 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 CCDC155Q8N6L0 562 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 NECAB1Q8N987 351 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 LMBR1Q8WVP7 490 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 SDF4Q9BRK5 362 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 PHF20Q9BVI0 1012 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 PBX4Q9BYU1 374 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 OSBPL7Q9BZF2 842 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 ERAP1Q9NZ08 941 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 ZNF215Q9UL58 517 aaPredicted RBP16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 A0A0C4DFX4 3053 aa16.01■□□□□ 0.15
RTFDC1-204ENST00000449062 CYP3A7-CYP3A51PA0A087WV96 503 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 MBLAC1A4D2B0 266 aaPredicted RBP16■□□□□ 0.15
RTFDC1-204ENST00000449062 CDKL5O76039 1030 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 PARNO95453 639 aaKnown RBP16■□□□□ 0.15
RTFDC1-204ENST00000449062 CYP3A7P24462 503 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 ST3GAL1Q11201 340 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 RPAINQ86UA6 219 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 GTF3C6Q969F1 213 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 MBOAT7Q96N66 472 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 KCNJ14Q9UNX9 436 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 SCN5AQ14524 2016 aa16■□□□□ 0.15
RTFDC1-204ENST00000449062 TMEM265A0A087WTH1 108 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 GNAT1P11488 350 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 INSRRP14616 1297 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 DNAJB2P25686 324 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 STAT5BP51692 787 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 MKRN4PQ13434 485 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 PLCB4Q15147 1175 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 PRR16Q569H4 304 aa15.99■□□□□ 0.15
RTFDC1-204ENST00000449062 FAM26DQ5JW98 314 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms