RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 SMIM10L2BP0DMW5 78 aa28.4■■■□□ 2.14
UFD1-204ENST00000447868 ACRP10323 421 aa28.4■■■□□ 2.14
UFD1-204ENST00000447868 SETQ01105 290 aaPredicted RBP28.4■■■□□ 2.14
UFD1-204ENST00000447868 RABEP1Q15276 862 aa28.4■■■□□ 2.14
UFD1-204ENST00000447868 CIITAP33076 1130 aa28.39■■■□□ 2.14
UFD1-204ENST00000447868 FOSBP53539 338 aa28.39■■■□□ 2.14
UFD1-204ENST00000447868 HIC1Q14526 733 aa28.39■■■□□ 2.14
UFD1-204ENST00000447868 GLG1Q92896 1179 aa28.39■■■□□ 2.14
UFD1-204ENST00000447868 ZNF577Q9BSK1 485 aa28.39■■■□□ 2.14
UFD1-204ENST00000447868 TRIP12Q14669 1992 aaPredicted RBP28.39■■■□□ 2.13
UFD1-204ENST00000447868 C17orf102A2RUQ5 167 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 IPO5O00410 1097 aaKnown RBP28.38■■■□□ 2.13
UFD1-204ENST00000447868 EDIL3O43854 480 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 USP11P51784 963 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 ACTR2P61160 394 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 BFSP2Q13515 415 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 C16orf59Q7L2K0 433 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 RETREG2Q8NC44 543 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 LRCH3Q96II8 777 aa28.38■■■□□ 2.13
UFD1-204ENST00000447868 ZSCAN31Q96LW9 406 aaPredicted RBP28.38■■■□□ 2.13
UFD1-204ENST00000447868 MARK3P27448 753 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 NONOQ15233 471 aaKnown RBP eCLIP28.37■■■□□ 2.13
UFD1-204ENST00000447868 KRT25Q7Z3Z0 450 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 CCDC155Q8N6L0 562 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 OXER1Q8TDS5 423 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 DHX38Q92620 1227 aaKnown RBP28.37■■■□□ 2.13
UFD1-204ENST00000447868 RNPC3Q96LT9 517 aaKnown RBP28.37■■■□□ 2.13
UFD1-204ENST00000447868 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.37■■■□□ 2.136e-7■■□□□ 13.8
UFD1-204ENST00000447868 RNPEPQ9H4A4 650 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 IL23AQ9NPF7 189 aa28.37■■■□□ 2.13
UFD1-204ENST00000447868 LENG9Q96B70 501 aa28.36■■■□□ 2.13
UFD1-204ENST00000447868 SMARCAD1Q9H4L7 1026 aa28.36■■■□□ 2.13
UFD1-204ENST00000447868 SETD4Q9NVD3 440 aa28.36■■■□□ 2.13
UFD1-204ENST00000447868 LAMA3Q16787 3333 aa28.36■■■□□ 2.13
UFD1-204ENST00000447868 CCDC194A0A1B0GVG4 234 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 PITPNM1O00562 1244 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 DHX15O43143 795 aaKnown RBP28.35■■■□□ 2.13
UFD1-204ENST00000447868 CCNE2O96020 404 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 PTK7Q13308 1070 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 INF2Q27J81 1249 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 TMEM240Q5SV17 173 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 ZNF365Q70YC5 407 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 CAGE1Q8TC20 777 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 ATP6V0A1Q93050 837 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 TBC1D32Q96NH3 1257 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 PCYT2Q99447 389 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 AZI2Q9H6S1 392 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 SH2B1Q9NRF2 756 aaPredicted RBP28.35■■■□□ 2.13
UFD1-204ENST00000447868 ERAP1Q9NZ08 941 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 SCN5AQ14524 2016 aa28.35■■■□□ 2.13
UFD1-204ENST00000447868 ST18O60284 1047 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 LGR5O75473 907 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 TDP2O95551 362 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 DEFB128Q7Z7B8 93 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 WNT8BQ93098 351 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 TBC1D22BQ9NU19 505 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 EMSYQ7Z589 1322 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 TANC1Q9C0D5 1861 aa28.34■■■□□ 2.13
UFD1-204ENST00000447868 TREHO43280 583 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 IQCF3P0C7M6 154 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 KRT2P35908 639 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 TRIM29Q14134 588 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 PSRC1Q6PGN9 363 aaPredicted RBP28.33■■■□□ 2.13
UFD1-204ENST00000447868 PIK3AP1Q6ZUJ8 805 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 RPUSD2Q8IZ73 545 aaKnown RBP28.33■■■□□ 2.13
UFD1-204ENST00000447868 BRMS1Q9HCU9 246 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 KAT6AQ92794 2004 aa28.33■■■□□ 2.13
UFD1-204ENST00000447868 MSH4O15457 936 aa28.32■■■□□ 2.12
UFD1-204ENST00000447868 HOXC8P31273 242 aa28.32■■■□□ 2.12
UFD1-204ENST00000447868 AFAP1L1Q8TED9 768 aa28.32■■■□□ 2.12
UFD1-204ENST00000447868 LMBR1Q8WVP7 490 aa28.32■■■□□ 2.12
UFD1-204ENST00000447868 LLPHQ9BRT6 129 aaKnown RBP28.32■■■□□ 2.12
UFD1-204ENST00000447868 TCEAL9Q9UHQ7 104 aa28.32■■■□□ 2.12
UFD1-204ENST00000447868 BACH1O14867 736 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 ATG7O95352 703 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 FGBP02675 491 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 GNAT1P11488 350 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 CKBP12277 381 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 SELPP16109 830 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 STAT5BP51692 787 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 PPFIA1Q13136 1202 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 NR5A1Q13285 461 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 LETM2Q2VYF4 491 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 Q4G0T1 1027 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 SERINC5Q86VE9 423 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 GJA10Q969M2 543 aa28.31■■■□□ 2.12
UFD1-204ENST00000447868 CYP3A7-CYP3A51PA0A087WV96 503 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 MMP1P03956 469 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 CYP3A7P24462 503 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 TRIM71Q2Q1W2 868 aaKnown RBP28.3■■■□□ 2.12
UFD1-204ENST00000447868 EARS2Q5JPH6 523 aaKnown RBP28.3■■■□□ 2.12
UFD1-204ENST00000447868 KRT40Q6A162 431 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 MIS18BP1Q6P0N0 1132 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 ABHD15Q6UXT9 468 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 LRRC8DQ7L1W4 858 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 OTOP2Q7RTS6 562 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 VWCEQ96DN2 955 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 BACH2Q9BYV9 841 aa28.3■■■□□ 2.12
UFD1-204ENST00000447868 TRPC6Q9Y210 931 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms