RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 SETD4Q9NVD3 440 aa16.82■□□□□ 0.28
USE1-202ENST00000445667 SLC9A2Q9UBY0 812 aa16.82■□□□□ 0.28
USE1-202ENST00000445667 ZBBXA8MT70 800 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 TREHO43280 583 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 PFKFB2O60825 505 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 CYP3A4P08684 503 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 SELPP16109 830 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 MARK3P27448 753 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 NEK4P51957 841 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 GPNMBQ14956 572 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 TRIM71Q2Q1W2 868 aaKnown RBP16.81■□□□□ 0.28
USE1-202ENST00000445667 ZNF697Q5TEC3 545 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 MCTP2Q6DN12 878 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 BICD2Q8TD16 824 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 AFAP1L1Q8TED9 768 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 FTOQ9C0B1 505 aaKnown RBP eCLIP16.81■□□□□ 0.28
USE1-202ENST00000445667 SEMA6BQ9H3T3 888 aa16.81■□□□□ 0.28
USE1-202ENST00000445667 JPH1Q9HDC5 661 aaPredicted RBP16.81■□□□□ 0.28
USE1-202ENST00000445667 ZNF215Q9UL58 517 aaPredicted RBP16.81■□□□□ 0.28
USE1-202ENST00000445667 SCN5AQ14524 2016 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 NFASCO94856 1347 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 IGLV3-22A0A075B6J6 115 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 DDX39AO00148 427 aaKnown RBP16.8■□□□□ 0.28
USE1-202ENST00000445667 PFKMP08237 780 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 HOXC8P31273 242 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 RFC2P35250 354 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 PBX2P40425 430 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 RBL2Q08999 1139 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 ANKRD1Q15327 319 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 LRRC8DQ7L1W4 858 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 SERINC5Q86VE9 423 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 NECAB1Q8N987 351 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 GLG1Q92896 1179 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 PCYT2Q99447 389 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
USE1-202ENST00000445667 MTIF3Q9H2K0 278 aaKnown RBP16.8■□□□□ 0.28
USE1-202ENST00000445667 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
USE1-202ENST00000445667 TRIP12Q14669 1992 aaPredicted RBP16.79■□□□□ 0.28
USE1-202ENST00000445667 EDIL3O43854 480 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 LARGE1O95461 756 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 DNAJB2P25686 324 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 THPOP40225 353 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 ACTR2P61160 394 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 ME3Q16798 604 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 C8orf34Q49A92 452 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 TRAF7Q6Q0C0 670 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 GUCD1Q96NT3 240 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 PBX4Q9BYU1 374 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 SMARCAD1Q9H4L7 1026 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 SLC4A7Q9Y6M7 1214 aa16.79■□□□□ 0.28
USE1-202ENST00000445667 NBNO60934 754 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 CDKL5O76039 1030 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 GNAT1P11488 350 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 ACTN1P12814 892 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 ADAM17P78536 824 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 ERAP1Q9NZ08 941 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
USE1-202ENST00000445667 IPO5O00410 1097 aaKnown RBP16.77■□□□□ 0.28
USE1-202ENST00000445667 DHX15O43143 795 aaKnown RBP16.77■□□□□ 0.28
USE1-202ENST00000445667 LGR5O75473 907 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 CCNE2O96020 404 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 CIITAP33076 1130 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 RABGGTBP53611 331 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 MBTPS1Q14703 1052 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 NPY5RQ15761 445 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 PRR16Q569H4 304 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 BLIDQ8IZY5 108 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 TIFAQ96CG3 184 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 ZNF577Q9BSK1 485 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 AZI2Q9H6S1 392 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
USE1-202ENST00000445667 EMSYQ7Z589 1322 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 NRCAMQ92823 1304 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 RSPH10B2B2RC85 870 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 M0R2N6 131 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 ATG7O95352 703 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 RSPH10BP0C881 870 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 STAT5BP51692 787 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 PPFIA1Q13136 1202 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 GRIK4Q16099 956 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 TCTN1Q2MV58 587 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 ORC3Q9UBD5 711 aaPredicted RBP16.76■□□□□ 0.27
USE1-202ENST00000445667 TANC1Q9C0D5 1861 aa16.76■□□□□ 0.27
USE1-202ENST00000445667 STK36Q9NRP7 1315 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 PARNO95453 639 aaKnown RBP16.75■□□□□ 0.27
USE1-202ENST00000445667 CXCL10P02778 98 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 CTSHP09668 335 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 INSRRP14616 1297 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 MYOGP15173 224 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 ATP2A2P16615 1042 aaKnown RBP16.75■□□□□ 0.27
USE1-202ENST00000445667 USP11P51784 963 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 IGBP1P78318 339 aa16.75■□□□□ 0.27
USE1-202ENST00000445667 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
USE1-202ENST00000445667 PLCB4Q15147 1175 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms