RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 KIAA0825Q8IV33 1275 aa13.9□□□□□ -0.18
TRO-215ENST00000445561 FAM133AQ8N9E0 248 aa13.9□□□□□ -0.18
TRO-215ENST00000445561 TBC1D5Q92609 795 aa13.9□□□□□ -0.18
TRO-215ENST00000445561 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRO-215ENST00000445561 PLEKHA4Q9H4M7 779 aa13.9□□□□□ -0.18
TRO-215ENST00000445561 SERPING1P05155 500 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 PRLRP16471 622 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 CRKP46108 304 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 MEX3CQ5U5Q3 659 aaKnown RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 SLFN13Q68D06 897 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 CCDC70Q6NSX1 233 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRO-215ENST00000445561 CATSPER3Q86XQ3 398 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 CEP63Q96MT8 703 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 PACSIN1Q9BY11 444 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 RBM12Q9NTZ6 932 aaKnown RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 PACSIN2Q9UNF0 486 aaPredicted RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 MYH4Q9Y623 1939 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 PALMO75781 387 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 FTCDO95954 541 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 ACTN1P12814 892 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 EPS15P42566 896 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 IRX5P78411 483 aaPredicted RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 PABPC4Q13310 644 aaKnown RBP eCLIP13.89□□□□□ -0.19
TRO-215ENST00000445561 ZNF572Q7Z3I7 529 aaPredicted RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 AENQ8WTP8 325 aaKnown RBP13.89□□□□□ -0.19
TRO-215ENST00000445561 BCAS3Q9H6U6 928 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 ADAMTS1Q9UHI8 967 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 ARFGEF1Q9Y6D6 1849 aa13.89□□□□□ -0.19
TRO-215ENST00000445561 A0A087X0T9 212 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 GDF11O95390 407 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 FAM228BP0C875 321 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 NR2F2P24468 414 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 KLRC1P26715 233 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 RBM5P52756 815 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRO-215ENST00000445561 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 CERKLQ49MI3 558 aaPredicted RBP13.88□□□□□ -0.19
TRO-215ENST00000445561 HAUS3Q68CZ6 603 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 FOXR2Q6PJQ5 311 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 DNAAF5Q86Y56 855 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 AFAP1L1Q8TED9 768 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 EDEM3Q9BZQ6 932 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 DHX36Q9H2U1 1008 aaKnown RBP13.88□□□□□ -0.19
TRO-215ENST00000445561 LCMT1Q9UIC8 334 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 FAM184BQ9ULE4 1060 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 RBAK-RBAKDNI3L0D1 243 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 USP11P51784 963 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 SPIRE1Q08AE8 756 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 KCNH2Q12809 1159 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 IKQ13123 557 aaPredicted RBP13.88□□□□□ -0.19
TRO-215ENST00000445561 HHIPL2Q6UWX4 724 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 SIAH1Q8IUQ4 282 aa13.88□□□□□ -0.19
TRO-215ENST00000445561 GOLGA6BA6NDN3 693 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 FAM86B1E9PN63 330 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 TRIM37O94972 964 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 GNA14O95837 355 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 FAM86B2P0C5J1 330 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 PAFAH1B1P43034 410 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 RNASE9P60153 205 aaKnown RBP13.87□□□□□ -0.19
TRO-215ENST00000445561 CYP4A11Q02928 519 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 KLHL30Q0D2K2 578 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 SH3BP5LQ7L8J4 393 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 GOLGA6L1Q8N7Z2 621 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 ETNPPLQ8TBG4 499 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 CCDC17Q96LX7 622 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 LRRC37AA6NMS7 1700 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 TULP2O00295 520 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 MARSP56192 900 aaKnown RBP13.87□□□□□ -0.19
TRO-215ENST00000445561 ITIH3Q06033 890 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 GIT2Q14161 759 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 KIAA0753Q2KHM9 967 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 SFR1Q86XK3 245 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
TRO-215ENST00000445561 REEP2Q9BRK0 252 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 STIM2Q9P246 746 aa13.87□□□□□ -0.19
TRO-215ENST00000445561 CYP3A7-CYP3A51PA0A087WV96 503 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 FRMD3A2A2Y4 597 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 RSPH10B2B2RC85 870 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 CETN3O15182 167 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 RSPH10BP0C881 870 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SPATA31C1P0DKV0 1188 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 MYBP10242 640 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SLC9A1P19634 815 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 CYP3A7P24462 503 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 ICA1Q05084 483 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SLC18A3Q16572 532 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 C8orf74Q6P047 294 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 LRRC31Q6UY01 552 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SLC30A10Q6XR72 485 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SLFN12Q8IYM2 578 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 RNF10Q8N5U6 811 aaKnown RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 CYP2W1Q8TAV3 490 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 SYN2Q92777 582 aaPredicted RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 NUCKS1Q9H1E3 243 aaKnown RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 EHD4Q9H223 541 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 GANQ9H2C0 597 aa13.86□□□□□ -0.19
TRO-215ENST00000445561 CWC15Q9P013 229 aaKnown RBP13.86□□□□□ -0.19
TRO-215ENST00000445561 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms