RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-208ENST00000444677 PRR16Q569H4 304 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 MCTP2Q6DN12 878 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 NIPA1Q7RTP0 329 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 TMEM199Q8N511 208 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 GJA10Q969M2 543 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 LENG9Q96B70 501 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 RNPEPQ9H4A4 650 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 SETD4Q9NVD3 440 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 SLC9A2Q9UBY0 812 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 NOD1Q9Y239 953 aa15.4■□□□□ 0.06
GARNL3-208ENST00000444677 MARK3P27448 753 aa15.39■□□□□ 0.05
GARNL3-208ENST00000444677 ACTR2P61160 394 aa15.39■□□□□ 0.05
GARNL3-208ENST00000444677 PPIGQ13427 754 aaKnown RBP eCLIP15.39■□□□□ 0.054e-8■■□□□ 12.8
GARNL3-208ENST00000444677 LRIT3Q3SXY7 679 aa15.39■□□□□ 0.05
GARNL3-208ENST00000444677 EARS2Q5JPH6 523 aaKnown RBP15.39■□□□□ 0.05
GARNL3-208ENST00000444677 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
GARNL3-208ENST00000444677 JPH1Q9HDC5 661 aaPredicted RBP15.39■□□□□ 0.05
GARNL3-208ENST00000444677 NFASCO94856 1347 aa15.39■□□□□ 0.05
GARNL3-208ENST00000444677 C17orf102A2RUQ5 167 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 FAM205CA6NFA0 338 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 TREHO43280 583 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 CD2BP2O95400 341 aaKnown RBP15.38■□□□□ 0.05
GARNL3-208ENST00000444677 TDP2O95551 362 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 INF2Q27J81 1249 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 TRIM71Q2Q1W2 868 aaKnown RBP15.38■□□□□ 0.05
GARNL3-208ENST00000444677 SDF4Q9BRK5 362 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 ZNF577Q9BSK1 485 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 IL23AQ9NPF7 189 aa15.38■□□□□ 0.05
GARNL3-208ENST00000444677 KIAA1217Q5T5P2 1943 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 IPO5O00410 1097 aaKnown RBP15.37■□□□□ 0.05
GARNL3-208ENST00000444677 MSH4O15457 936 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 LGR5O75473 907 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 ATG7O95352 703 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 IQCF3P0C7M6 154 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 USP11P51784 963 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 NR5A1Q13285 461 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 GPNMBQ14956 572 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 RABEP1Q15276 862 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 GALNT17Q6IS24 598 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 DEFB128Q7Z7B8 93 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 RETREG2Q8NC44 543 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 GLG1Q92896 1179 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 ZBTB10Q96DT7 871 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 TBC1D32Q96NH3 1257 aa15.37■□□□□ 0.05
GARNL3-208ENST00000444677 XBP1P17861 261 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 HOXC8P31273 242 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 GUCY1B3Q02153 619 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 PTK7Q13308 1070 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 NONOQ15233 471 aaKnown RBP eCLIP15.36■□□□□ 0.05
GARNL3-208ENST00000444677 KRT40Q6A162 431 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 FAM109BQ6ICB4 259 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-208ENST00000444677 TRAF7Q6Q0C0 670 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 ABHD15Q6UXT9 468 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 PIK3AP1Q6ZUJ8 805 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 KRT25Q7Z3Z0 450 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 WASF1Q92558 559 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 ATP6V0A1Q93050 837 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 RNPC3Q96LT9 517 aaKnown RBP15.36■□□□□ 0.05
GARNL3-208ENST00000444677 ZSCAN31Q96LW9 406 aaPredicted RBP15.36■□□□□ 0.05
GARNL3-208ENST00000444677 SCN10AQ9Y5Y9 1956 aa15.36■□□□□ 0.05
GARNL3-208ENST00000444677 FGBP02675 491 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 CKBP12277 381 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 ADAM17P78536 824 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 BFSP2Q13515 415 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 PLCB4Q15147 1175 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 TCTN1Q2MV58 587 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 LETM2Q2VYF4 491 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 ZNF618Q5T7W0 954 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 Q7L0L9 218 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 OTOP2Q7RTS6 562 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 CCDC60Q8IWA6 550 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-208ENST00000444677 FAM177A1Q8N128 213 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-208ENST00000444677 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 TNFRSF25Q93038 417 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 BACH2Q9BYV9 841 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 OSBPL7Q9BZF2 842 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 SMARCAD1Q9H4L7 1026 aa15.35■□□□□ 0.05
GARNL3-208ENST00000444677 UPF2Q9HAU5 1272 aaKnown RBP15.35■□□□□ 0.05
GARNL3-208ENST00000444677 CXXC1Q9P0U4 656 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-208ENST00000444677 ZNF215Q9UL58 517 aaPredicted RBP15.35■□□□□ 0.05
GARNL3-208ENST00000444677 CYP3A7-CYP3A51PA0A087WV96 503 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 IGKV6D-21A0A0A0MT36 114 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 CCDC194A0A1B0GVG4 234 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 GRXCR1A8MXD5 290 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 BTBD18B2RXH4 712 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 PITPNM1O00562 1244 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 SLC37A4O43826 429 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 SELPP16109 830 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 ATP4AP20648 1035 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 CYP3A7P24462 503 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 KRT2P35908 639 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 STAT5BP51692 787 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 IGBP1P78318 339 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
GARNL3-208ENST00000444677 PPFIA1Q13136 1202 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 Q4G0T1 1027 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 RASIP1Q5U651 963 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
GARNL3-208ENST00000444677 RUFY4Q6ZNE9 571 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms