RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 JADE2Q9NQC1 790 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 SETD4Q9NVD3 440 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 ERAP1Q9NZ08 941 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 PCDHA6Q9UN73 950 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 PCDHA8Q9Y5H6 950 aa18.71■□□□□ 0.59
CTDSP1-204ENST00000443891 LCHNA4D1U4 455 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 LINC01553A4QN01 128 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 LPXNO60711 386 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 ITGB5P18084 799 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 RXRAP19793 462 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 TCF7P36402 384 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 UTP14CQ5TAP6 766 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 FAM43BQ6ZT52 329 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 CMTR1Q8N1G2 835 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 SP7Q8TDD2 431 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 LMBR1Q8WVP7 490 aa18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 UHRF1Q96T88 793 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 SPTBN5Q9NRC6 3674 aaKnown RBP18.7■□□□□ 0.58
CTDSP1-204ENST00000443891 ATP9AO75110 1047 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 BMP1P13497 986 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 ARHGAP4P98171 946 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 HEATR3Q7Z4Q2 680 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 MYOCDQ8IZQ8 938 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 HLA-CQ95604 372 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 TOP1MTQ969P6 601 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 RIC8AQ9NPQ8 531 aa18.69■□□□□ 0.58
CTDSP1-204ENST00000443891 MBLAC1A4D2B0 266 aaPredicted RBP18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 RRN3P2A6NIE6 340 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 ZBTB43O43298 467 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 AP3B2Q13367 1082 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 RTN1Q16799 776 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 TRIM50Q86XT4 487 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 CCDC82Q8N4S0 544 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 MXRA8Q9BRK3 442 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 LRRC2Q9BYS8 371 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 SUGCTQ9HAC7 445 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 NFASCO94856 1347 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 CNTNAP5Q8WYK1 1306 aa18.68■□□□□ 0.58
CTDSP1-204ENST00000443891 CCDC196A0A1B0GTZ2 297 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 GSTTP1A0A1W2PQM5 241 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 CDC45O75419 566 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 SP4Q02446 784 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 PPFIA1Q13136 1202 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 UBE2SQ16763 222 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 TMCO2Q7Z6W1 182 aaPredicted RBP18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 GLG1Q92896 1179 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 IFIH1Q9BYX4 1025 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 JPH1Q9HDC5 661 aaPredicted RBP18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 SQORQ9Y6N5 450 aa18.67■□□□□ 0.58
CTDSP1-204ENST00000443891 COL4A6Q14031 1691 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 PRRC2BQ5JSZ5 2229 aaKnown RBP18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 CTSHP09668 335 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 NAPAP54920 295 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 FUT2Q10981 343 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 COL9A3Q14050 684 aaPredicted RBP18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 WWC2Q6AWC2 1192 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 NIPA1Q7RTP0 329 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 SDF4Q9BRK5 362 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 AZI2Q9H6S1 392 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 KCNH7Q9NS40 1196 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 BARHL2Q9NY43 387 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 SLC9A2Q9UBY0 812 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 TUBE1Q9UJT0 475 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 PTPRSQ13332 1948 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 TRANK1O15050 2925 aa18.66■□□□□ 0.58
CTDSP1-204ENST00000443891 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 SLC26A2P50443 739 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 ADCY7P51828 1080 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 GRIK4Q16099 956 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 PTPROQ16827 1216 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 CEP55Q53EZ4 464 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 FAM117BQ6P1L5 589 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 PLPPR4Q7Z2D5 763 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 FBXO22Q8NEZ5 403 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 GDPD5Q8WTR4 605 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 YME1L1Q96TA2 773 aa18.65■□□□□ 0.58
CTDSP1-204ENST00000443891 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 GOLGA8AA7E2F4 631 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 GOLGA8BA8MQT2 603 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 TFF2Q03403 129 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 MGAT3Q09327 533 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 KRT40Q6A162 431 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 RAB11FIP4Q86YS3 637 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 FBXL16Q8N461 479 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 KCNB2Q92953 911 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 BRPF3Q9ULD4 1205 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 RWDD3Q9Y3V2 267 aa18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 V9GY48 417 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-204ENST00000443891 SMCO2A6NFE2 343 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 STXBP3O00186 592 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 MEIS1O00470 390 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 CHRNA1P02708 482 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 SREBF1P36956 1147 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 CLK2P49760 499 aaKnown RBP18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 IER5Q5VY09 327 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
CTDSP1-204ENST00000443891 RASEFQ8IZ41 740 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms