RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 WNT8BQ93098 351 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 MXRA8Q9BRK3 442 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 SLC26A6Q9BXS9 759 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 RNPEPQ9H4A4 650 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 PRDM12Q9H4Q4 367 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 KCNH7Q9NS40 1196 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 SETD4Q9NVD3 440 aa22.66■■□□□ 1.22
SHROOM1-204ENST00000440118 PTPRSQ13332 1948 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 TREHO43280 583 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 MARK3P27448 753 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 HIC1Q14526 733 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 CEP55Q53EZ4 464 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 TRIM22Q8IYM9 498 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 AZI2Q9H6S1 392 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 ERAP1Q9NZ08 941 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 TELO2Q9Y4R8 837 aa22.65■■□□□ 1.22
SHROOM1-204ENST00000440118 RSPH10B2B2RC85 870 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 CPLX1O14810 134 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 PRPF3O43395 683 aaKnown RBP22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 NBNO60934 754 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 PPFIA3O75145 1194 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 CTSHP09668 335 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 RSPH10BP0C881 870 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 MYOGP15173 224 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 GNA11P29992 359 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 SREBF1P36956 1147 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 PPFIA1Q13136 1202 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 TRIM71Q2Q1W2 868 aaKnown RBP22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 PHOSPHO2Q8TCD6 241 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 LMBR1Q8WVP7 490 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 ZBED2Q9BTP6 218 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 RNF26Q9BY78 433 aaPredicted RBP22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 AGXT2Q9BYV1 514 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 UPF3BQ9BZI7 483 aaKnown RBP22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 NCOA5Q9HCD5 579 aaKnown RBP22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 ZSWIM6Q9HCJ5 1215 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 SLC9A2Q9UBY0 812 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 MICAL3Q7RTP6 2002 aa22.64■■□□□ 1.21
SHROOM1-204ENST00000440118 NRCAMQ92823 1304 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 ESYT2A0FGR8 921 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 CXCL10P02778 98 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 CA3P07451 260 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 IKBKEQ14164 716 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 MCTP2Q6DN12 878 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 HERC6Q8IVU3 1022 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 CYP2W1Q8TAV3 490 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 BICD2Q8TD16 824 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 SMARCAD1Q9H4L7 1026 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 CUL9Q8IWT3 2517 aa22.63■■□□□ 1.21
SHROOM1-204ENST00000440118 EFCAB14O75071 495 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 CAND2O75155 1236 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 LGR5O75473 907 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 IGFBP4P22692 258 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 PDIA3P30101 505 aaKnown RBP22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 CLK2P49760 499 aaKnown RBP22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 WDR5P61964 334 aaKnown RBP22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 CPLX2Q6PUV4 134 aaKnown RBP22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 ZMYND12Q9H0C1 365 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 TCEAL9Q9UHQ7 104 aa22.62■■□□□ 1.21
SHROOM1-204ENST00000440118 NFASCO94856 1347 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 ABHD14A-ACY1A0A1B0GW23 586 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 GSTTP1A0A1W2PQM5 241 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 DDX39AO00148 427 aaKnown RBP22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 TLL1O43897 1013 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 IFNAR1P17181 557 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 HOXC8P31273 242 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 TM6SF1Q9BZW5 370 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 AGO4Q9HCK5 861 aaKnown RBP22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 PDRG1Q9NUG6 133 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 TRPC6Q9Y210 931 aa22.61■■□□□ 1.21
SHROOM1-204ENST00000440118 CHD9Q3L8U1 2897 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 ARP10275 920 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 IGBP1P78318 339 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 SSRP1Q08945 709 aaKnown RBP22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 STK3Q13188 491 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 TOB2Q14106 344 aaPredicted RBP22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 GRIK4Q16099 956 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 PKN1Q16512 942 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 RSPH3Q86UC2 560 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 PLA2G4DQ86XP0 818 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 TNPO1Q92973 898 aaKnown RBP22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 VPS54Q9P1Q0 977 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 TUBE1Q9UJT0 475 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 EYSQ5T1H1 3165 aa22.6■■□□□ 1.21
SHROOM1-204ENST00000440118 MYH9P35579 1960 aaKnown RBP22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 UNC80Q8N2C7 3258 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 ACTR2P61160 394 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 SETQ01105 290 aaPredicted RBP22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 MBTPS1Q14703 1052 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 GPNMBQ14956 572 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 TAF2Q6P1X5 1199 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 TRAF7Q6Q0C0 670 aa22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 LARP6Q9BRS8 491 aaKnown RBP22.59■■□□□ 1.21
SHROOM1-204ENST00000440118 MEIS1O00470 390 aa22.58■■□□□ 1.21
SHROOM1-204ENST00000440118 BACH1O14867 736 aa22.58■■□□□ 1.21
SHROOM1-204ENST00000440118 EVCP57679 992 aa22.58■■□□□ 1.21
SHROOM1-204ENST00000440118 NLRP5P59047 1200 aa22.58■■□□□ 1.21
SHROOM1-204ENST00000440118 DEFB103AP81534 67 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms