RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 PYGBP11216 843 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 FAM83BQ5T0W9 1011 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 CHMP6Q96FZ7 201 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 GDF3Q9NR23 364 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD4-209ENST00000439886 ABCC12Q96J65 1359 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 SPDYE3A6NKU9 549 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 CHN1P15882 459 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 TFAP4Q01664 338 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 TROAPQ12815 778 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 ARMC9Q7Z3E5 817 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 GLIS3Q8NEA6 775 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 CUL5Q93034 780 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 SWAP70Q9UH65 585 aa12.76□□□□□ -0.37
SMPD4-209ENST00000439886 WTIPA6NIX2 430 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 KLRC4O43908 158 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 FAM163BP0C2L3 166 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 PRPHP41219 470 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 SEC23AQ15436 765 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 NLRP10Q86W26 655 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 FAM228AQ86W67 206 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 TSPYL2Q9H2G4 693 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 ELF3P78545 371 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 GNPTABQ3T906 1256 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 USP38Q8NB14 1042 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 KLHL29Q96CT2 875 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 PRMT1Q99873 361 aaKnown RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 TTYH3Q9C0H2 523 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 NEUROG2Q9H2A3 272 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 SNX24Q9Y343 169 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 NALCNQ8IZF0 1738 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 ZNF211Q13398 564 aaPredicted RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 CAPRIN2Q6IMN6 1127 aaKnown RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 BICDL1Q6ZP65 573 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 GJA10Q969M2 543 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 BICD1Q96G01 975 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 ERGIC2Q96RQ1 377 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 A1CFQ9NQ94 594 aaKnown RBP12.75□□□□□ -0.37
SMPD4-209ENST00000439886 PCDHA4Q9UN74 947 aa12.75□□□□□ -0.37
SMPD4-209ENST00000439886 CCT8L1PA6NM43 557 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PDE8AO60658 829 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 OR52Z1P0C646 297 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 ACTN1P12814 892 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PRLRP16471 622 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PCK1P35558 622 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 TRAPPC10P48553 1259 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 ICA1Q05084 483 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PPP2R5BQ15173 497 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 YTHDF3Q7Z739 585 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 TRIM42Q8IWZ5 723 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 LRRC34Q8IZ02 419 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 U2AF1L4Q8WU68 220 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 EZH1Q92800 747 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PURBQ96QR8 312 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 AZI2Q9H6S1 392 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 MRC1P22897 1456 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 CNTNAP5Q8WYK1 1306 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PGRMC1O00264 195 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 MAGEA8P43361 318 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 ARL6IP4Q66PJ3 421 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 PNMA1Q8ND90 353 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 GDAP1Q8TB36 358 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 SNX29Q8TEQ0 813 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 XPO6Q96QU8 1125 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 NOC2LQ9Y3T9 749 aaKnown RBP12.74□□□□□ -0.37
SMPD4-209ENST00000439886 SPATA31A3Q5VYP0 1347 aa12.74□□□□□ -0.37
SMPD4-209ENST00000439886 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 PDHA1P08559 390 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 NEFHP12036 1026 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 RAB27AP51159 221 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 DENND2CQ68D51 928 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 KIAA0895Q8NCT3 520 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 TRIM4Q9C037 500 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 BMP2KQ9NSY1 1161 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-209ENST00000439886 BLOC1S6Q9UL45 172 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 POTEMA6NI47 508 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 EVI5O60447 810 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 FGGP02679 453 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 SERPING1P05155 500 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 DRP2Q13474 957 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 MTMR3Q13615 1198 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 PLCB4Q15147 1175 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 DYNLL2Q96FJ2 89 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 ARPP21Q9UBL0 812 aaPredicted RBP12.73□□□□□ -0.37
SMPD4-209ENST00000439886 AFDNP55196 1824 aaKnown RBP12.73□□□□□ -0.37
SMPD4-209ENST00000439886 USP17L3A6NCW0 530 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 USP17L4A6NCW7 530 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 H0Y3Z8 333 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 TNNI2P48788 182 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 BIRC3Q13489 604 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 USP17L1Q7RTZ2 530 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 LMBR1Q8WVP7 490 aa12.73□□□□□ -0.37
SMPD4-209ENST00000439886 FMO2Q99518 471 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms