RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 NCANO14594 1321 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 FAM83GA6ND36 823 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 DNAJC8O75937 253 aaPredicted RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 COL6A2P12110 1019 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 MYCLP1P12525 358 aaPredicted RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 GPR85P60893 370 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 GRIN1Q05586 938 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 SPIRE1Q08AE8 756 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 ZNF460Q14592 562 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 CR1LQ2VPA4 569 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 FNDC3BQ53EP0 1204 aaKnown RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 TM4SF20Q53R12 229 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 TMC5Q6UXY8 1006 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 MTDHQ86UE4 582 aaKnown RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 LINC00482Q8N8I6 264 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 PHOSPHO1Q8TCT1 267 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 ADAMTS17Q8TE56 1095 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 PTPRN2Q92932 1015 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 TEPSINQ96N21 525 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 CLIC6Q96NY7 704 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 ZFYVE21Q9BQ24 234 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 BDH2Q9BUT1 245 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 MRPL4Q9BYD3 311 aaKnown RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 SLKQ9H2G2 1235 aaPredicted RBP5.03□□□□□ -1.6
VPS41-207ENST00000439468 SLC6A20Q9NP91 592 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 SFMBT1Q9UHJ3 866 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 CROTQ9UKG9 612 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 PCDHA8Q9Y5H6 950 aa5.03□□□□□ -1.6
VPS41-207ENST00000439468 A0A087X0B3 334 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 TADA3O75528 432 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 CRTAMO95727 393 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 SOD2P04179 222 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 CELA3BP08861 270 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 RPL13P26373 211 aaKnown RBP5.02□□□□□ -1.61
VPS41-207ENST00000439468 CNR2P34972 360 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 BUD31P41223 144 aaPredicted RBP5.02□□□□□ -1.61
VPS41-207ENST00000439468 GABREP78334 506 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 PLP2Q04941 152 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 RTP5Q14D33 572 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 RGL3Q3MIN7 710 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 MCTP2Q6DN12 878 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 STYK1Q6J9G0 422 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 TEPPQ6URK8 271 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 OTOP3Q7RTS5 596 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 FERMT3Q86UX7 667 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 ZNF761Q86XN6 746 aaPredicted RBP5.02□□□□□ -1.61
VPS41-207ENST00000439468 TRIM48Q8IWZ4 208 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 RBM12BQ8IXT5 1001 aaKnown RBP5.02□□□□□ -1.61
VPS41-207ENST00000439468 SYNPOQ8N3V7 929 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 GSTCDQ8NEC7 633 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 CXorf38Q8TB03 319 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.02□□□□□ -1.61
VPS41-207ENST00000439468 SPC25Q9HBM1 224 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 ASH2LQ9UBL3 628 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 NUB1Q9Y5A7 615 aa5.02□□□□□ -1.61
VPS41-207ENST00000439468 TNPO3Q9Y5L0 923 aaKnown RBP5.02□□□□□ -1.61
VPS41-207ENST00000439468 FAM47E-STBD1D6RA91 191 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 DDX3XO00571 662 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-207ENST00000439468 DNAJC6O75061 913 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 RFPL3O75679 317 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 CYP1A1P04798 512 aaPredicted RBP5.01□□□□□ -1.61
VPS41-207ENST00000439468 PCBP1Q15365 356 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS41-207ENST00000439468 PTPROQ16827 1216 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 TRIM61Q5EBN2 209 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 RNF187Q5TA31 235 aaPredicted RBP5.01□□□□□ -1.61
VPS41-207ENST00000439468 CYP4F22Q6NT55 531 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 ABHD17CQ6PCB6 329 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 FAM124AQ86V42 546 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 MFSD3Q96ES6 412 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 TMEM209Q96SK2 561 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 TARS2Q9BW92 718 aaKnown RBP5.01□□□□□ -1.61
VPS41-207ENST00000439468 KRTAP4-5Q9BYR2 181 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 CDIP1Q9H305 208 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 IPPKQ9H8X2 491 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 L2HGDHQ9H9P8 463 aa5.01□□□□□ -1.61
VPS41-207ENST00000439468 AQP7O14520 342 aa5□□□□□ -1.61
VPS41-207ENST00000439468 PRICKLE3O43900 615 aaPredicted RBP5□□□□□ -1.61
VPS41-207ENST00000439468 NOBOXO60393 691 aa5□□□□□ -1.61
VPS41-207ENST00000439468 CYP7B1O75881 506 aa5□□□□□ -1.61
VPS41-207ENST00000439468 LRG1P02750 347 aa5□□□□□ -1.61
VPS41-207ENST00000439468 LTFP02788 710 aa5□□□□□ -1.61
VPS41-207ENST00000439468 APPP05067 770 aa5□□□□□ -1.61
VPS41-207ENST00000439468 SRGAP2CP0DJJ0 459 aa5□□□□□ -1.61
VPS41-207ENST00000439468 KCNA6P17658 529 aa5□□□□□ -1.61
VPS41-207ENST00000439468 AMPD3Q01432 767 aa5□□□□□ -1.61
VPS41-207ENST00000439468 GUCY1A3Q02108 690 aa5□□□□□ -1.61
VPS41-207ENST00000439468 ADAM9Q13443 819 aa5□□□□□ -1.61
VPS41-207ENST00000439468 TUSC3Q13454 348 aa5□□□□□ -1.61
VPS41-207ENST00000439468 VASNQ6EMK4 673 aa5□□□□□ -1.61
VPS41-207ENST00000439468 EP400NLQ6ZTU2 488 aa5□□□□□ -1.61
VPS41-207ENST00000439468 LRRTM3Q86VH5 581 aa5□□□□□ -1.61
VPS41-207ENST00000439468 THNSL2Q86YJ6 484 aa5□□□□□ -1.61
VPS41-207ENST00000439468 WRNIP1Q96S55 665 aa5□□□□□ -1.61
VPS41-207ENST00000439468 RBPJLQ9UBG7 517 aa5□□□□□ -1.61
VPS41-207ENST00000439468 DSEQ9UL01 958 aa5□□□□□ -1.61
VPS41-207ENST00000439468 TCRBV16S1A1N1A0A5B0 115 aa4.99□□□□□ -1.61
VPS41-207ENST00000439468 GSG1L2A8MUP6 293 aa4.99□□□□□ -1.61
VPS41-207ENST00000439468 NKRFO15226 690 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS41-207ENST00000439468 PPM1GO15355 546 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms