RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 MTMR1Q13613 665 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 MTMR2Q13614 643 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 C2orf69Q8N8R5 385 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 DNAI2Q9GZS0 605 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 NDST4Q9H3R1 872 aa12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 SEPT9Q9UHD8 586 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC9-202ENST00000438773 LRRIQ4A6NIV6 560 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 IPO5O00410 1097 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 TEX33O43247 280 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 FCER1AP12319 257 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 TNNI1P19237 187 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ECE1P42892 770 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ADD3Q9UEY8 706 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 KCNG1Q9UIX4 513 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 HPSEQ9Y251 543 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 GAKO14976 1311 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 GOLGA6L10A0A0M3HER8 536 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 CCND2P30279 289 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 KIAA0753Q2KHM9 967 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ANGEL2Q5VTE6 544 aaKnown RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 DPH6Q7L8W6 267 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZFPM1Q8IX07 1006 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ANKRD13CQ8N6S4 541 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 RETREG2Q8NC44 543 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 IFT81Q8WYA0 676 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 EHD4Q9H223 541 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 RASSF4Q9H2L5 321 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 KCND1Q9NSA2 647 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 FBXO28Q9NVF7 368 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 SOWAHDA6NJG2 315 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 DPYDQ12882 1025 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 CEP55Q53EZ4 464 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 REXO1L1PQ8IX06 675 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 HPS3Q969F9 1004 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 IRX2Q9BZI1 471 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 HAUS4Q9H6D7 363 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 RPAP3Q9H6T3 665 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 HOXC10Q9NYD6 342 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 TRPC6Q9Y210 931 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 SCN11AQ9UI33 1791 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ATRNO75882 1429 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 HGSO14964 777 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 TADA3O75528 432 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZRANB2O95218 330 aaKnown RBP eCLIP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 CTNNA2P26232 953 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 CEP57Q86XR8 500 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 METTL13Q8N6R0 699 aa12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 TRPM3Q9HCF6 1732 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC9-202ENST00000438773 LIG4P49917 911 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 TUBB4BP68371 445 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 COASYQ13057 564 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 SFR1Q86XK3 245 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 DYDC2Q96IM9 177 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 HNRNPDLO14979 420 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 DLATP10515 647 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 GJC1P36383 396 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 PRELPP51888 382 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 IFFO1Q0D2I5 559 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 SMC1AQ14683 1233 aaKnown RBP12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 NBPF9Q3BBW0 867 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 RGL1Q9NZL6 768 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 SMIM23A6NLE4 172 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 VEGFAP15692 232 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 TOGARAM2Q6ZUX3 1019 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 MB21D1Q8N884 522 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 BANK1Q8NDB2 785 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 SLC7A3Q8WY07 619 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 POMGNT1Q8WZA1 660 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 KIFAP3Q92845 792 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 GGA3Q9NZ52 723 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 FAM184BQ9ULE4 1060 aa12.67□□□□□ -0.38
TRAPPC9-202ENST00000438773 CYTH3O43739 400 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZBED6P86452 979 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 KCNB1Q14721 858 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 LPAR1Q92633 364 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 PCIF1Q9H4Z3 704 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 RIOX1Q9H6W3 641 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 GSTTP1A0A1W2PQM5 241 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 PSMC2P35998 433 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 MKRN3Q13064 507 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 TRPC3Q13507 836 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 TUBB2AQ13885 445 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 ANKS1AQ92625 1134 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 TUBB2BQ9BVA1 445 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 NRBP2Q9NSY0 501 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 LGALS16A8MUM7 142 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 WDR46O15213 610 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 MFAP3LO75121 409 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 SLURP2P0DP57 97 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 TGFB2P61812 414 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 ZSCAN26Q16670 478 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 BRDTQ58F21 947 aaPredicted RBP12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 ACRBPQ8NEB7 543 aa12.66□□□□□ -0.38
TRAPPC9-202ENST00000438773 SLC10A4Q96EP9 437 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms