RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ZNF213O14771 459 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 OPLAHO14841 1288 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 KDM4AO75164 1064 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 LINC00271P0C7V0 271 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 ARHGAP4P98171 946 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 NUCB1Q02818 461 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 TCF15Q12870 199 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 NMIQ13287 307 aaPredicted RBP16.31■□□□□ 0.2
LINC01088-201ENST00000437737 STOX1Q6ZVD7 989 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 USP26Q9BXU7 913 aa16.31■□□□□ 0.2
LINC01088-201ENST00000437737 ZNF215Q9UL58 517 aaPredicted RBP16.31■□□□□ 0.2
LINC01088-201ENST00000437737 GFRA3O60609 400 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 GHRP10912 638 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 ZXDAP98168 799 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 GHRHRQ02643 423 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 FAM26DQ5JW98 314 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 ANKRD45Q5TZF3 282 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 CHD1LQ86WJ1 897 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 FBXL6Q8N531 539 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
LINC01088-201ENST00000437737 ZSCAN10Q96SZ4 725 aaPredicted RBP16.3■□□□□ 0.2
LINC01088-201ENST00000437737 PLVAPQ9BX97 442 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 RC3H2Q9HBD1 1191 aaKnown RBP16.3■□□□□ 0.2
LINC01088-201ENST00000437737 FAM86C1Q9NVL1 165 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 TRIOO75962 3097 aa16.3■□□□□ 0.2
LINC01088-201ENST00000437737 EYA4O95677 639 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 NT5C2P49902 561 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 GNPTABQ3T906 1256 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 UTP14CQ5TAP6 766 aaKnown RBP16.29■□□□□ 0.2
LINC01088-201ENST00000437737 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 TRIM50Q86XT4 487 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 LMBR1Q8WVP7 490 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 MSLNLQ96KJ4 702 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 BCAS3Q9H6U6 928 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 PLAGL2Q9UPG8 496 aa16.29■□□□□ 0.2
LINC01088-201ENST00000437737 TTC3P53804 2025 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 B4E1Z4 1266 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 LOC730098B7Z3J9 87 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 GCOM1H8Y6P7 765 aaPredicted RBP16.28■□□□□ 0.2
LINC01088-201ENST00000437737 CHRNA1P02708 482 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 POLR2MP0CAP2 368 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 MFAP1P55081 439 aaKnown RBP16.28■□□□□ 0.2
LINC01088-201ENST00000437737 NEDD9Q14511 834 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 METTL7BQ6UX53 244 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 CYFIP1Q7L576 1253 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 SAMD3Q8N6K7 520 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 ENAHQ8N8S7 591 aaPredicted RBP16.28■□□□□ 0.2
LINC01088-201ENST00000437737 P2RX5Q93086 422 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 ZNF689Q96CS4 500 aaPredicted RBP16.28■□□□□ 0.2
LINC01088-201ENST00000437737 GPR20Q99678 358 aa16.28■□□□□ 0.2
LINC01088-201ENST00000437737 ENPP3O14638 875 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 ZBTB5O15062 677 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 PPP1R11O60927 126 aaPredicted RBP16.27■□□□□ 0.2
LINC01088-201ENST00000437737 SP4Q02446 784 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 SIGLEC14Q08ET2 396 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 COASYQ13057 564 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 CAMK1Q14012 370 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 ADGRD2Q7Z7M1 963 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 RSPH3Q86UC2 560 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 HOMER1Q86YM7 354 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 STAG2Q8N3U4 1231 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 EFHBQ8N7U6 833 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 SMRP1Q8NCR6 262 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 ATOH1Q92858 354 aaPredicted RBP16.27■□□□□ 0.2
LINC01088-201ENST00000437737 CLEC1BQ9P126 229 aa16.27■□□□□ 0.2
LINC01088-201ENST00000437737 BARX2Q9UMQ3 279 aaPredicted RBP16.27■□□□□ 0.2
LINC01088-201ENST00000437737 MRPL42Q9Y6G3 142 aaKnown RBP16.27■□□□□ 0.2
LINC01088-201ENST00000437737 NRCAMQ92823 1304 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 KLRF2D3W0D1 207 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 DGKIO75912 1065 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 ITGB1P05556 798 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 DNAJB1P25685 340 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 NRIP1P48552 1158 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 PDE1AP54750 535 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 VCPP55072 806 aaKnown RBP16.26■□□□□ 0.19
LINC01088-201ENST00000437737 ADAM17P78536 824 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 LPIN1Q14693 890 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 TAF2Q6P1X5 1199 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 RUFY4Q6ZNE9 571 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 RBM23Q86U06 439 aaKnown RBP16.26■□□□□ 0.19
LINC01088-201ENST00000437737 RILPL2Q969X0 211 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 RPGRIP1Q96KN7 1286 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 IRF2BPLQ9H1B7 796 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 EHMT1Q9H9B1 1298 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 USP15Q9Y4E8 981 aaPredicted RBP16.26■□□□□ 0.19
LINC01088-201ENST00000437737 PLXNA4Q9HCM2 1894 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 ZDBF2Q9HCK1 2354 aa16.26■□□□□ 0.19
LINC01088-201ENST00000437737 USP34Q70CQ2 3546 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 ICAM3P32942 547 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 MGAT3Q09327 533 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 TRAF1Q13077 416 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 CBX2Q14781 532 aaPredicted RBP16.25■□□□□ 0.19
LINC01088-201ENST00000437737 NAALADL2Q58DX5 795 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 IFIT1BQ5T764 474 aaKnown RBP16.25■□□□□ 0.19
LINC01088-201ENST00000437737 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 CMTR2Q8IYT2 770 aaKnown RBP16.25■□□□□ 0.19
LINC01088-201ENST00000437737 KLHL23Q8NBE8 558 aa16.25■□□□□ 0.19
LINC01088-201ENST00000437737 SPPL3Q8TCT6 385 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms