RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 MARCKSP29966 332 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CIITAP33076 1130 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 SERPINB4P48594 390 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 ATP2C1P98194 919 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 GRIN1Q05586 938 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 SREBF2Q12772 1141 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 NOGQ13253 232 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 IL17AQ16552 155 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 AXDND1Q5T1B0 1012 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 DNAJC14Q6Y2X3 702 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 NCAPG2Q86XI2 1143 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 SHCBP1Q8NEM2 672 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 KCNG4Q8TDN1 519 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 FOXJ1Q92949 421 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 MBOAT7Q96N66 472 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 PORCNQ9H237 461 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 TMEM60Q9H2L4 133 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 MROH8Q9H579 483 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 EFCC1Q9HA90 598 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 FBXO40Q9UH90 709 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 CPA4Q9UI42 421 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 FBXO2Q9UK22 296 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 PCDHGA11Q9Y5H2 935 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 MORC2Q9Y6X9 1032 aaPredicted RBP7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 FRMPD4Q14CM0 1322 aa7.98□□□□□ -1.13
LSM3P3-201ENST00000436601 RLFQ13129 1914 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 FAM86B1E9PN63 330 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 SLC37A4O43826 429 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 BMP15O95972 392 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 FAM86B2P0C5J1 330 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 BCRP11274 1271 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 COPB2P35606 906 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 ME1P48163 572 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 UBE2HP62256 183 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 UBXN2AP68543 259 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 HTRA3P83110 453 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 CNTN2Q02246 1040 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 TAF1CQ15572 869 aaPredicted RBP7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 OCLNQ16625 522 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 LINC01559Q495D7 138 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 C4orf48Q5BLP8 95 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 PPP4R3AQ6IN85 833 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 MOXD1Q6UVY6 613 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 ANKRD35Q8N283 1001 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 TPCN2Q8NHX9 752 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 IL31RAQ8NI17 732 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 CYP2W1Q8TAV3 490 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 GPT2Q8TD30 523 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 LENG9Q96B70 501 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 MTMR9Q96QG7 549 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 CEP131Q9UPN4 1083 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 FCF1Q9Y324 198 aaKnown RBP7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 ASTN1O14525 1302 aa7.97□□□□□ -1.13
LSM3P3-201ENST00000436601 A0A0G2JMZ2 1700 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 DNAJC25-GNG10A0A024R161 153 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 IGLV3-22A0A075B6J6 115 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 A0A1W2PQ27 194 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 A0A1W2PQ64 194 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 A0A1W2PQD8 194 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 CA12O43570 354 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 NEMFO60524 1076 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 TLR2O60603 784 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 CUTAO60888 179 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PGK2P07205 417 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 GCFC2P16383 781 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 ITGB5P18084 799 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 EIF2AK2P19525 551 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 VEGFBP49765 207 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 CCNA1P78396 465 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 MRPS9P82933 396 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 CRHR2Q13324 411 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 ORC2Q13416 577 aaPredicted RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PGM5Q15124 567 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 FAM110CQ1W6H9 321 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 Q4G0T1 1027 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 ARHGEF16Q5VV41 709 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PCNX4Q63HM2 1172 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 ADALQ6DHV7 355 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 SHC4Q6S5L8 630 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 C17orf99Q6UX52 265 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 FAM133AQ8N9E0 248 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 NSUN6Q8TEA1 469 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 HAS1Q92839 578 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 FERMT2Q96AC1 680 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 FGD4Q96M96 766 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 RMDN3Q96TC7 470 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 MMP19Q99542 508 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 NAP1L4Q99733 375 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PDCD2LQ9BRP1 358 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 EHMT1Q9H9B1 1298 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 ZFYVE28Q9HCC9 887 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PXMP2Q9NR77 195 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 DDX25Q9UHL0 483 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PCDHB11Q9Y5F2 797 aa7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 SRPRBQ9Y5M8 271 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 DDX49Q9Y6V7 483 aaKnown RBP7.96□□□□□ -1.14
LSM3P3-201ENST00000436601 PFASO15067 1338 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms