RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 ZBTB5O15062 677 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 ARHGEF15O94989 841 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 IGFBP4P22692 258 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.41
HMGCL-204ENST00000436439 SAFBQ15424 915 aaKnown RBP eCLIP12.46□□□□□ -0.41
HMGCL-204ENST00000436439 PTGISQ16647 500 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
HMGCL-204ENST00000436439 PPP2R2DQ66LE6 453 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 GALNT17Q6IS24 598 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 CCDC148Q8NFR7 591 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 IL31RAQ8NI17 732 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 CCDC12Q8WUD4 166 aaPredicted RBP12.46□□□□□ -0.41
HMGCL-204ENST00000436439 ZFP91Q96JP5 570 aaPredicted RBP12.46□□□□□ -0.41
HMGCL-204ENST00000436439 PDCD2LQ9BRP1 358 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 GJB4Q9NTQ9 266 aa12.46□□□□□ -0.41
HMGCL-204ENST00000436439 hCG_1642624A0A1W2PR95 340 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 ESYT2A0FGR8 921 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 STXBP3O00186 592 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 RFXAPO00287 272 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 SORBS3O60504 671 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 EIF3JO75822 258 aaKnown RBP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 CA3P07451 260 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 ZNF286BP0CG31 522 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 MYCLP12524 364 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 RFC2P35250 354 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 GUCY1B3Q02153 619 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 NPY5RQ15761 445 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 FOXD4L5Q5VV16 416 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 WWC2Q6AWC2 1192 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 PPP1R18Q6NYC8 613 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 FERMT3Q86UX7 667 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 HOMER1Q86YM7 354 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 RETREG2Q8NC44 543 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 DAGLBQ8NCG7 672 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 FOXD4L4Q8WXT5 416 aaPredicted RBP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 GPKOWQ92917 476 aaPredicted RBP eCLIP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 PIGSQ96S52 555 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 VPS54Q9P1Q0 977 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 HDAC6Q9UBN7 1215 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 NOD1Q9Y239 953 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 PCDHA1Q9Y5I3 950 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 MRVI1Q9Y6F6 885 aa12.45□□□□□ -0.42
HMGCL-204ENST00000436439 TCF20Q9UGU0 1960 aaKnown RBP12.45□□□□□ -0.42
HMGCL-204ENST00000436439 EPOPA6NHQ4 379 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 HAS3O00219 553 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 ACTN1P12814 892 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 PSEN2P49810 448 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 FOSBP53539 338 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 SP2Q02086 613 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 TRAF1Q13077 416 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 BFSP2Q13515 415 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 HIC1Q14526 733 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 PGM5Q15124 567 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 DGKDQ16760 1214 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 TCTN1Q2MV58 587 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 TJAP1Q5JTD0 557 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 SPRED2Q7Z698 418 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 TEX2Q8IWB9 1127 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 TMEM87AQ8NBN3 555 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 WNT8BQ93098 351 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 EMID1Q96A84 441 aaPredicted RBP12.44□□□□□ -0.42
HMGCL-204ENST00000436439 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
HMGCL-204ENST00000436439 ZMYND12Q9H0C1 365 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 BRMS1Q9HCU9 246 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 GTF2IRD1Q9UHL9 959 aa12.44□□□□□ -0.42
HMGCL-204ENST00000436439 KIF28PB7ZC32 967 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 F2P00734 622 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 KRT2P35908 639 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 KRT85P78386 507 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 ZNF200P98182 395 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 HSDL1Q3SXM5 330 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MYSM1Q5VVJ2 828 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TMCO2Q7Z6W1 182 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 NOSTRINQ8IVI9 506 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 DHX37Q8IY37 1157 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 DIS3L2Q8IYB7 885 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 PPTC7Q8NI37 304 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 CAGE1Q8TC20 777 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 SYMPKQ92797 1274 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 SLC9A7Q96T83 725 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 THEGQ9P2T0 379 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 CFAP45Q9UL16 551 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 PCDHA4Q9UN74 947 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 KCNJ14Q9UNX9 436 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MICAL3Q7RTP6 2002 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MUC3AQ02505 3323 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 BTBD18B2RXH4 712 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 M0R2N6 131 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 NBNO60934 754 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 GGPS1O95749 300 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 CKBP12277 381 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 HOXD8P13378 290 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 GNA11P29992 359 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 NLRP5P59047 1200 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 RBL2Q08999 1139 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms