RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 SMIM10L2BP0DMW5 78 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 GNAT1P11488 350 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 PTK7Q13308 1070 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 ITGB3BPQ13352 177 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-207ENST00000435455 RABEP1Q15276 862 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 NPY5RQ15761 445 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 PSRC1Q6PGN9 363 aaPredicted RBP18.47■□□□□ 0.55
SMPD4-207ENST00000435455 KRT25Q7Z3Z0 450 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 TRIM50Q86XT4 487 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 RPUSD2Q8IZ73 545 aaKnown RBP18.47■□□□□ 0.55
SMPD4-207ENST00000435455 TBCKQ8TEA7 893 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 RNPC3Q96LT9 517 aaKnown RBP18.47■□□□□ 0.55
SMPD4-207ENST00000435455 CTAGE1Q96RT6 745 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 SMARCAD1Q9H4L7 1026 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 TBC1D22BQ9NU19 505 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 KCNJ14Q9UNX9 436 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 EMSYQ7Z589 1322 aa18.47■□□□□ 0.55
SMPD4-207ENST00000435455 SOX1O00570 391 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-207ENST00000435455 HOXC8P31273 242 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 RFC2P35250 354 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 ACTR2P61160 394 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 RBL2Q08999 1139 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 NONOQ15233 471 aaKnown RBP eCLIP18.46■□□□□ 0.55
SMPD4-207ENST00000435455 PRR16Q569H4 304 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 TMEM240Q5SV17 173 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 AFAP1L1Q8TED9 768 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 GLG1Q92896 1179 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 SCLYQ96I15 445 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.46■□□□□ 0.557e-7■■■■□ 19.3
SMPD4-207ENST00000435455 ZNF577Q9BSK1 485 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 SH2B1Q9NRF2 756 aaPredicted RBP18.46■□□□□ 0.55
SMPD4-207ENST00000435455 ERAP1Q9NZ08 941 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 TCEAL9Q9UHQ7 104 aa18.46■□□□□ 0.55
SMPD4-207ENST00000435455 CCDC194A0A1B0GVG4 234 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 LGR5O75473 907 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 PFKMP08237 780 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 FDPSP14324 419 aaKnown RBP18.45■□□□□ 0.54
SMPD4-207ENST00000435455 GPR153Q6NV75 609 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 C16orf59Q7L2K0 433 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 ATP6V0A1Q93050 837 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 MTIF3Q9H2K0 278 aaKnown RBP18.45■□□□□ 0.54
SMPD4-207ENST00000435455 RNPEPQ9H4A4 650 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 AZI2Q9H6S1 392 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 BRMS1Q9HCU9 246 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 SCN5AQ14524 2016 aa18.45■□□□□ 0.54
SMPD4-207ENST00000435455 DHX15O43143 795 aaKnown RBP18.44■□□□□ 0.54
SMPD4-207ENST00000435455 DTNBO60941 627 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 ATG7O95352 703 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 PARNO95453 639 aaKnown RBP18.44■□□□□ 0.54
SMPD4-207ENST00000435455 FGBP02675 491 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 ACRP10323 421 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 ZNF200P98182 395 aaPredicted RBP18.44■□□□□ 0.54
SMPD4-207ENST00000435455 ZNF365Q70YC5 407 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 SERINC5Q86VE9 423 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 DHX38Q92620 1227 aaKnown RBP18.44■□□□□ 0.54
SMPD4-207ENST00000435455 LENG9Q96B70 501 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 LRCH3Q96II8 777 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 LLPHQ9BRT6 129 aaKnown RBP18.44■□□□□ 0.54
SMPD4-207ENST00000435455 NRCAMQ92823 1304 aa18.44■□□□□ 0.54
SMPD4-207ENST00000435455 MYH9P35579 1960 aaKnown RBP18.43■□□□□ 0.54
SMPD4-207ENST00000435455 CYP3A7-CYP3A51PA0A087WV96 503 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 DDX39AO00148 427 aaKnown RBP18.43■□□□□ 0.54
SMPD4-207ENST00000435455 ST18O60284 1047 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 JAK2O60674 1132 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 IQCF3P0C7M6 154 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 SELPP16109 830 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 CYP3A7P24462 503 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 TRIM29Q14134 588 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 ZNF746Q6NUN9 644 aaPredicted RBP18.43■□□□□ 0.54
SMPD4-207ENST00000435455 MOXD1Q6UVY6 613 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 PLPPR4Q7Z2D5 763 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 CCDC83Q8IWF9 413 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 TNPO1Q92973 898 aaKnown RBP18.43■□□□□ 0.54
SMPD4-207ENST00000435455 SETD4Q9NVD3 440 aa18.43■□□□□ 0.54
SMPD4-207ENST00000435455 EDIL3O43854 480 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 CCNE2O96020 404 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 CKBP12277 381 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 SLC26A2P50443 739 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 STAT5BP51692 787 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 KRT76Q01546 638 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 ST3GAL1Q11201 340 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 HIC1Q14526 733 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 INF2Q27J81 1249 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 TRIM71Q2Q1W2 868 aaKnown RBP18.42■□□□□ 0.54
SMPD4-207ENST00000435455 Q4G0T1 1027 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 FAM160B1Q5W0V3 765 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 ABHD15Q6UXT9 468 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 LRRC8DQ7L1W4 858 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 HERVK_113Q902F9 699 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 TBC1D32Q96NH3 1257 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 PCYT2Q99447 389 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 GJB4Q9NTQ9 266 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 SZT2Q5T011 3432 aa18.42■□□□□ 0.54
SMPD4-207ENST00000435455 IGKV6D-21A0A0A0MT36 114 aa18.41■□□□□ 0.54
SMPD4-207ENST00000435455 BACH1O14867 736 aa18.41■□□□□ 0.54
SMPD4-207ENST00000435455 TREHO43280 583 aa18.41■□□□□ 0.54
SMPD4-207ENST00000435455 SLC34A2O95436 690 aa18.41■□□□□ 0.54
SMPD4-207ENST00000435455 GCFC2P16383 781 aaKnown RBP18.41■□□□□ 0.54
SMPD4-207ENST00000435455 MARK3P27448 753 aa18.41■□□□□ 0.54
SMPD4-207ENST00000435455 KRT2P35908 639 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms