RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 SUGCTQ9HAC7 445 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 SETD4Q9NVD3 440 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 MTUS1Q9ULD2 1270 aa17.06■□□□□ 0.32
RPUSD3-208ENST00000433972 LPXNO60711 386 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 CTSHP09668 335 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TCF7P36402 384 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 HTRA4P83105 476 aaPredicted RBP17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 NECTIN1Q15223 517 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 FAM26DQ5JW98 314 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TMTC3Q6ZXV5 915 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 HEATR3Q7Z4Q2 680 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 MICU3Q86XE3 530 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TRIM50Q86XT4 487 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 LMBR1Q8WVP7 490 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TOP1MTQ969P6 601 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 IFIH1Q9BYX4 1025 aaKnown RBP17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 SMARCAD1Q9H4L7 1026 aa17.05■□□□□ 0.32
RPUSD3-208ENST00000433972 TRANK1O15050 2925 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 hCG_1984214I3L0E3 225 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 KCNA2P16389 499 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 PPFIA1Q13136 1202 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 KRT40Q6A162 431 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 PPP1R18Q6NYC8 613 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 ZNF713Q8N859 430 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 SP7Q8TDD2 431 aaPredicted RBP17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 GLG1Q92896 1179 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 C1QTNF1Q9BXJ1 281 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 BCAS3Q9H6U6 928 aa17.04■□□□□ 0.32
RPUSD3-208ENST00000433972 FOSP01100 380 aaPredicted RBP17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 RXRAP19793 462 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 KCNQ1P51787 676 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 ADAM17P78536 824 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 KRT32Q14532 448 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 AZI2Q9H6S1 392 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 JADE2Q9NQC1 790 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 TUBE1Q9UJT0 475 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 PCDHA6Q9UN73 950 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 PCDHA8Q9Y5H6 950 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
RPUSD3-208ENST00000433972 TET1Q8NFU7 2136 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 RRN3P2A6NIE6 340 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 ITGB5P18084 799 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 TIGD5Q53EQ6 642 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 CMTR1Q8N1G2 835 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 CCDC82Q8N4S0 544 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 MRPL38Q96DV4 380 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 NEK1Q96PY6 1258 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 SDF4Q9BRK5 362 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 JPH1Q9HDC5 661 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.32
RPUSD3-208ENST00000433972 MYO9BQ13459 2157 aa17.02■□□□□ 0.31
RPUSD3-208ENST00000433972 TRIP12Q14669 1992 aaPredicted RBP17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 ATP9AO75110 1047 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 HMGB1P09429 215 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 NAPAP54920 295 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 GRIK4Q16099 956 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 UBE2SQ16763 222 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 EPC2Q52LR7 807 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 APOA5Q6Q788 366 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 SPRED2Q7Z698 418 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 C17orf80Q9BSJ5 609 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 COL4A6Q14031 1691 aa17.01■□□□□ 0.31
RPUSD3-208ENST00000433972 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 M0QZ92 97 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 ZBTB43O43298 467 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 EPB41L2O43491 1005 aaKnown RBP17■□□□□ 0.31
RPUSD3-208ENST00000433972 UPP2O95045 317 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 COL9A1P20849 921 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 MARK3P27448 753 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 RCAN1P53805 252 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 AP3B2Q13367 1082 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 RTN1Q16799 776 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 IER5Q5VY09 327 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 FAM43BQ6ZT52 329 aaPredicted RBP17■□□□□ 0.31
RPUSD3-208ENST00000433972 DHX32Q7L7V1 743 aaKnown RBP17■□□□□ 0.31
RPUSD3-208ENST00000433972 IL17RAQ96F46 866 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 LRRC2Q9BYS8 371 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 UBE2ZQ9H832 354 aaPredicted RBP17■□□□□ 0.31
RPUSD3-208ENST00000433972 RIC8AQ9NPQ8 531 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
RPUSD3-208ENST00000433972 NFASCO94856 1347 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 CCDC196A0A1B0GTZ2 297 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 GSTTP1A0A1W2PQM5 241 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 hCG_1642624A0A1W2PR95 340 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 MBLAC1A4D2B0 266 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 H3BNC9 293 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 GHRP10912 638 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 SLC26A2P50443 739 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 ADCY7P51828 1080 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 PUS10Q3MIT2 529 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 TSHZ1Q6ZSZ6 1077 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 FIBCD1Q8N539 461 aa16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 NECAB3Q96P71 396 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-208ENST00000433972 MXRA8Q9BRK3 442 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms