RNA–Protein interactions for RNA: ENST00000432877.5

CNOT9-204, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 3

Gene CNOT9, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-204ENST00000432877 ARHGAP4P98171 946 aa20.23■□□□□ 0.83
CNOT9-204ENST00000432877 RSPH3Q86UC2 560 aa20.23■□□□□ 0.83
CNOT9-204ENST00000432877 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
CNOT9-204ENST00000432877 TCEAL5Q5H9L2 206 aa20.22■□□□□ 0.83
CNOT9-204ENST00000432877 UTP14CQ5TAP6 766 aaKnown RBP20.22■□□□□ 0.83
CNOT9-204ENST00000432877 IGDCC4Q8TDY8 1250 aa20.22■□□□□ 0.83
CNOT9-204ENST00000432877 LMBR1Q8WVP7 490 aa20.22■□□□□ 0.83
CNOT9-204ENST00000432877 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
CNOT9-204ENST00000432877 MTA3Q9BTC8 594 aa20.22■□□□□ 0.83
CNOT9-204ENST00000432877 EHMT1Q9H9B1 1298 aa20.22■□□□□ 0.83
CNOT9-204ENST00000432877 COL4A4P53420 1690 aaPredicted RBP20.22■□□□□ 0.83
CNOT9-204ENST00000432877 FAM86C2PA6NEL3 165 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 E7EWF7 191 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 CHRNA1P02708 482 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 BMPR1AP36894 532 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 GNAQP50148 359 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 CTCFLQ8NI51 663 aaPredicted RBP20.21■□□□□ 0.83
CNOT9-204ENST00000432877 SEPT1Q8WYJ6 367 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 GPRASP2Q96D09 838 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 C11orf84Q9BUA3 381 aaPredicted RBP20.21■□□□□ 0.83
CNOT9-204ENST00000432877 OSBPL7Q9BZF2 842 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 SENP2Q9HC62 589 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 COL4A6Q14031 1691 aa20.21■□□□□ 0.83
CNOT9-204ENST00000432877 H3BQ06 376 aaPredicted RBP20.2■□□□□ 0.82
CNOT9-204ENST00000432877 MEIS2O14770 477 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 MAFGO15525 162 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 PTH1RQ03431 593 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 USP17L6PQ6QN14 398 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 TRIM50Q86XT4 487 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 TMTC2Q8N394 836 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 UPF3BQ9BZI7 483 aaKnown RBP20.2■□□□□ 0.82
CNOT9-204ENST00000432877 ERAP1Q9NZ08 941 aa20.2■□□□□ 0.82
CNOT9-204ENST00000432877 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
CNOT9-204ENST00000432877 SIP14410 1827 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 POTEB3A0JP26 581 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 ENPP3O14638 875 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 DDAH1O94760 285 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 CHMLP26374 656 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 CSPP1Q1MSJ5 1256 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 POTEBQ6S5H4 581 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
CNOT9-204ENST00000432877 CLP1Q92989 425 aaKnown RBP20.19■□□□□ 0.82
CNOT9-204ENST00000432877 PLVAPQ9BX97 442 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 MYH7BA7E2Y1 1941 aa20.19■□□□□ 0.82
CNOT9-204ENST00000432877 MYH6P13533 1939 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 C19orf67A6NJJ6 358 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 DCXO43602 365 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 GSPT1P15170 499 aaKnown RBP20.18■□□□□ 0.82
CNOT9-204ENST00000432877 CTNNB1P35222 781 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 TCF7P36402 384 aaPredicted RBP20.18■□□□□ 0.82
CNOT9-204ENST00000432877 CTC1Q2NKJ3 1217 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 FAM43BQ6ZT52 329 aaPredicted RBP20.18■□□□□ 0.82
CNOT9-204ENST00000432877 ADHFE1Q8IWW8 467 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 KCNH6Q9H252 994 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 SMARCAD1Q9H4L7 1026 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 PSTPIP2Q9H939 334 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 CLDND1Q9NY35 253 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 SQORQ9Y6N5 450 aa20.18■□□□□ 0.82
CNOT9-204ENST00000432877 MBLAC1A4D2B0 266 aaPredicted RBP20.17■□□□□ 0.82
CNOT9-204ENST00000432877 GHRP10912 638 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 SP4Q02446 784 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 ZP2Q05996 745 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 MGAT3Q09327 533 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 PPFIA1Q13136 1202 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 EP400NLQ6ZTU2 488 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 MB21D2Q8IYB1 491 aaPredicted RBP20.17■□□□□ 0.82
CNOT9-204ENST00000432877 ZNF654Q8IZM8 581 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 PIBF1Q8WXW3 757 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 MAP4K1Q92918 833 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 RC3H2Q9HBD1 1191 aaKnown RBP20.17■□□□□ 0.82
CNOT9-204ENST00000432877 BRWD1Q9NSI6 2320 aa20.17■□□□□ 0.82
CNOT9-204ENST00000432877 MICAL3Q7RTP6 2002 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 RRN3P2A6NIE6 340 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 SGSM2O43147 1006 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 ATP9AO75110 1047 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 LINC00271P0C7V0 271 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 KCNA2P16389 499 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 ANTXR2P58335 489 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 LPIN1Q14693 890 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 GRIK4Q16099 956 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 NAALADL2Q58DX5 795 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 CASC1Q6TDU7 716 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 RUFY4Q6ZNE9 571 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 GLG1Q92896 1179 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 ZNF689Q96CS4 500 aaPredicted RBP20.16■□□□□ 0.82
CNOT9-204ENST00000432877 POP1Q99575 1024 aaKnown RBP20.16■□□□□ 0.82
CNOT9-204ENST00000432877 FTHL17Q9BXU8 183 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 LY9Q9HBG7 655 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 TUBE1Q9UJT0 475 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 ADGRA3Q8IWK6 1321 aa20.16■□□□□ 0.82
CNOT9-204ENST00000432877 GSTTP1A0A1W2PQM5 241 aa20.15■□□□□ 0.82
CNOT9-204ENST00000432877 CALM1P0DP23 149 aa20.15■□□□□ 0.82
CNOT9-204ENST00000432877 CALM2P0DP24 149 aa20.15■□□□□ 0.82
CNOT9-204ENST00000432877 CALM3P0DP25 149 aa20.15■□□□□ 0.82
CNOT9-204ENST00000432877 LTBRP36941 435 aa20.15■□□□□ 0.82
CNOT9-204ENST00000432877 BTG3Q14201 252 aaPredicted RBP20.15■□□□□ 0.82
CNOT9-204ENST00000432877 SMAD2Q15796 467 aaKnown RBP20.15■□□□□ 0.82
CNOT9-204ENST00000432877 FBXO47Q5MNV8 452 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms