RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 WASF3Q9UPY6 502 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 EFR3BQ9Y2G0 817 aa3.3□□□□□ -1.88
CDC40-204ENST00000431461 CHGBP05060 677 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 COL6A1P12109 1028 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 IL12RB1P42701 662 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 NASPP49321 788 aaPredicted RBP3.29□□□□□ -1.88
CDC40-204ENST00000431461 PPP2R5EQ16537 467 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 STEAP3Q658P3 488 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 TMC5Q6UXY8 1006 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 CCDC103Q8IW40 242 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 DIO2Q92813 273 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 RBPJLQ9UBG7 517 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 PPP1R1BQ9UD71 204 aaPredicted RBP3.29□□□□□ -1.88
CDC40-204ENST00000431461 PRKAG3Q9UGI9 489 aa3.29□□□□□ -1.88
CDC40-204ENST00000431461 TMEFF2Q9UIK5 374 aaPredicted RBP3.29□□□□□ -1.88
CDC40-204ENST00000431461 COA3Q9Y2R0 106 aaPredicted RBP3.29□□□□□ -1.88
CDC40-204ENST00000431461 MYO1BO43795 1136 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 KLHL18O94889 574 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 CNOT4O95628 575 aaKnown RBP3.28□□□□□ -1.88
CDC40-204ENST00000431461 ONECUT2O95948 504 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 SCG5P05408 212 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 C1SP09871 688 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 HOXC12P31275 282 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 KCNAB2Q13303 367 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 LSAMPQ13449 338 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 NCAPHQ15003 741 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 NFE2L2Q16236 605 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 FXNQ16595 210 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 ACBD5Q5T8D3 534 aaPredicted RBP3.28□□□□□ -1.88
CDC40-204ENST00000431461 LRP10Q7Z4F1 713 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 RCBTB1Q8NDN9 531 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 PHOSPHO1Q8TCT1 267 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 ZNF669Q96BR6 464 aaPredicted RBP3.28□□□□□ -1.88
CDC40-204ENST00000431461 AJUBAQ96IF1 538 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 SHDQ96IW2 340 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 PRRX2Q99811 253 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 EPN3Q9H201 632 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 SMOC1Q9H4F8 434 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 PCDHB4Q9Y5E5 795 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 SLC4A7Q9Y6M7 1214 aa3.28□□□□□ -1.88
CDC40-204ENST00000431461 PLSCR1O15162 318 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 KRTAP10-11P60412 298 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 CYP4F22Q6NT55 531 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 Q6ZUG5 572 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 RALYLQ86SE5 291 aaKnown RBP3.27□□□□□ -1.89
CDC40-204ENST00000431461 MRGPRGQ86SM5 289 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 PROSER1Q86XN7 944 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 LDLRAD3Q86YD5 345 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 MCF2L2Q86YR7 1114 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 KREMEN2Q8NCW0 462 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 NUDT10Q8NFP7 164 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.27□□□□□ -1.89
CDC40-204ENST00000431461 MKL1Q969V6 931 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 NUDT11Q96G61 164 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 CCDC140Q96MF4 163 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 PLEKHG4BQ96PX9 1271 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 LMF1Q96S06 567 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 TRIM55Q9BYV6 548 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 ACTR10Q9NZ32 417 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 SIRPGQ9P1W8 387 aa3.27□□□□□ -1.89
CDC40-204ENST00000431461 AGRPO00253 132 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 MEFVO15553 781 aaPredicted RBP3.26□□□□□ -1.89
CDC40-204ENST00000431461 MAFKO60675 156 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 DGKIO75912 1065 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 CPP00450 1065 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 ADH4P08319 380 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 ITGB6P18564 788 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 RBL2Q08999 1139 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 SMAD2Q15796 467 aaKnown RBP3.26□□□□□ -1.89
CDC40-204ENST00000431461 CCDC142Q17RM4 750 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 TAX1BP1Q86VP1 789 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 C1orf210Q8IVY1 113 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 TRIM48Q8IWZ4 208 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 DTX3Q8N9I9 347 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 TTLL11Q8NHH1 800 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 PDGFDQ9GZP0 370 aaPredicted RBP3.26□□□□□ -1.89
CDC40-204ENST00000431461 KATNBL1Q9H079 304 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 MYOTQ9UBF9 498 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 ASH2LQ9UBL3 628 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 FBXL7Q9UJT9 491 aa3.26□□□□□ -1.89
CDC40-204ENST00000431461 IQCA1LA6NCM1 817 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 KNG1P01042 644 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 MAKP20794 623 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 ACO1P21399 889 aaKnown RBP3.25□□□□□ -1.89
CDC40-204ENST00000431461 COMTP21964 271 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 CSF2RBP32927 897 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 GTF2F1P35269 517 aaKnown RBP eCLIP3.25□□□□□ -1.89
CDC40-204ENST00000431461 LTBRP36941 435 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 ZC3H12BQ5HYM0 836 aaKnown RBP3.25□□□□□ -1.89
CDC40-204ENST00000431461 AGBL4Q5VU57 503 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 PCSK4Q6UW60 755 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 EEPD1Q7L9B9 569 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 FUKQ8N0W3 1084 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 BTN2A2Q8WVV5 523 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 LARP4BQ92615 738 aaKnown RBP3.25□□□□□ -1.89
CDC40-204ENST00000431461 ANAPC16Q96DE5 110 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 CHAMP1Q96JM3 812 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 AGAP2Q99490 1192 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 LGR4Q9BXB1 951 aa3.25□□□□□ -1.89
CDC40-204ENST00000431461 CDIP1Q9H305 208 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms