RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LILRA2Q8N149 483 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 OXR1Q8N573 874 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 LMBR1Q8WVP7 490 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 SEC14L1Q92503 715 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 TSR2Q969E8 191 aaKnown RBP4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 HOOK2Q96ED9 719 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 YIPF4Q9BSR8 244 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 RHOBTB2Q9BYZ6 727 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZDHHC5Q9C0B5 715 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 PRDM7Q9NQW5 492 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 MBNL3Q9NUK0 354 aaKnown RBP4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 GEMIN8Q9NWZ8 242 aaKnown RBP4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 BTG4Q9NY30 223 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 HSPBP1Q9NZL4 362 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 TCRBV5S2A0A599 114 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 RASSF10A6NK89 507 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 KRIT1O00522 736 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 KCNK3O14649 394 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 HGSO14964 777 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 DBHP09172 617 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 RBP3P10745 1247 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 PNLIPP16233 465 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 PRKCAP17252 672 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC9A1P19634 815 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 GJA4P35212 333 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 IARSP41252 1262 aaKnown RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 ERVFC1P60507 584 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 ERVFRD-1P60508 538 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 PPP2R5AQ15172 486 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 EPHA7Q15375 998 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 CHRNA2Q15822 529 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 CATSPEREQ5SY80 951 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 STEAP3Q658P3 488 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 CPZQ66K79 652 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 NXNQ6DKJ4 435 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 NOL8Q76FK4 1167 aaKnown RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 DCP2Q8IU60 420 aaKnown RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 C1orf162Q8NEQ5 155 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 NUP43Q8NFH3 380 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 SYTL4Q96C24 671 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 AHCYL2Q96HN2 611 aaKnown RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 FUBP3Q96I24 572 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 CD244Q9BZW8 370 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 RC3H2Q9HBD1 1191 aaKnown RBP4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 ACSS2Q9NR19 701 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 KCNH7Q9NS40 1196 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC52A1Q9NWF4 448 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 CTNND2Q9UQB3 1225 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 ATP23Q9Y6H3 246 aa4.27□□□□□ -1.73
HMGB1P27-201ENST00000431429 ACOT7O00154 380 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC27A2O14975 620 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA12O60330 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 CYP17A1P05093 508 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 RNASE1P07998 156 aaKnown RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PTPN1P18031 435 aaKnown RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 KRT15P19012 456 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TACR1P25103 407 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PTX3P26022 381 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 LSP1P33241 339 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 THBS2P35442 1172 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 GPR3P46089 330 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 KIF11P52732 1056 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 HK2P52789 917 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TBX4P57082 545 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TUSC3Q13454 348 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PDCD1Q15116 288 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 ABCB5Q2M3G0 1257 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PASD1Q8IV76 773 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TCEAL8Q8IYN2 117 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 CLEC4DQ8WXI8 215 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 FOXRED1Q96CU9 486 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 SMAD5Q99717 465 aaKnown RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 MS4A5Q9H3V2 200 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TOPORSQ9NS56 1045 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZIM2Q9NZV7 527 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 USP36Q9P275 1121 aaKnown RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 MYOTQ9UBF9 498 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 TCEAL9Q9UHQ7 104 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA9Q9Y5G4 932 aaKnown RBP4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA8Q9Y5G5 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA7Q9Y5G6 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA6Q9Y5G7 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA3Q9Y5H0 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 PCDHGA2Q9Y5H1 932 aa4.26□□□□□ -1.73
HMGB1P27-201ENST00000431429 SCDO00767 359 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 BUB1BO60566 1050 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 MAFKO60675 156 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 LTFP02788 710 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 CYBBP04839 570 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 HERVK_113P62684 666 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 CYP4F8P98187 520 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZNF174Q15697 407 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 SLC14A2Q15849 920 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 RGL3Q3MIN7 710 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 FAM102BQ5T8I3 360 aa4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 HDGFL2Q7Z4V5 671 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 RTN4RL1Q86UN2 441 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P27-201ENST00000431429 ZBTB46Q86UZ6 589 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms