RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 MREGQ8N565 214 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 PANK4Q9NVE7 773 aa16.52■□□□□ 0.24
LINC00839-202ENST00000429940 PACSIN2Q9UNF0 486 aaPredicted RBP16.52■□□□□ 0.24
LINC00839-202ENST00000429940 CDK5RAP2Q96SN8 1893 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 ZEB2O60315 1214 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 CLSTN1O94985 981 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 INPP5BP32019 993 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 TNNI2P48788 182 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 ARID5AQ03989 594 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 ECM1Q16610 540 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 FAM26FQ5R3K3 315 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 B4GALNT4Q76KP1 1039 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 CASKIN2Q8WXE0 1202 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.23
LINC00839-202ENST00000429940 UPF1Q92900 1129 aaKnown RBP eCLIP16.52■□□□□ 0.23
LINC00839-202ENST00000429940 PCDHGC5Q9Y5F6 944 aa16.52■□□□□ 0.23
LINC00839-202ENST00000429940 A0A087X0T9 212 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 FAM228BP0C875 321 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 RNASE9P60153 205 aaKnown RBP16.51■□□□□ 0.23
LINC00839-202ENST00000429940 SEPT2Q15019 361 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 MMS22LQ6ZRQ5 1243 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 TEX11Q8IYF3 940 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 PIK3R5Q8WYR1 880 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 RNPC3Q96LT9 517 aaKnown RBP16.51■□□□□ 0.23
LINC00839-202ENST00000429940 CEP63Q96MT8 703 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 INPP4AQ96PE3 977 aaPredicted RBP16.51■□□□□ 0.23
LINC00839-202ENST00000429940 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.51■□□□□ 0.23
LINC00839-202ENST00000429940 ANKRD31Q8N7Z5 1873 aa16.51■□□□□ 0.23
LINC00839-202ENST00000429940 SSBP05455 408 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC00839-202ENST00000429940 ENOX2Q16206 610 aaKnown RBP16.5■□□□□ 0.23
LINC00839-202ENST00000429940 ZNF804AQ7Z570 1209 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 WHAMMQ8TF30 809 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 KAT2BQ92831 832 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 ZBTB7AO95365 584 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 GNA14O95837 355 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 PDHBP11177 359 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 TNNC1P63316 161 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 KLHL30Q0D2K2 578 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 CDC37Q16543 378 aaPredicted RBP16.5■□□□□ 0.23
LINC00839-202ENST00000429940 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 CERS3Q8IU89 383 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 TRIM59Q8IWR1 403 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
LINC00839-202ENST00000429940 CD302Q8IX05 232 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 NELFCDQ8IXH7 590 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 FAM133AQ8N9E0 248 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 PACSIN1Q9BY11 444 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 KANSL2Q9H9L4 492 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 BMP2KQ9NSY1 1161 aaPredicted RBP16.5■□□□□ 0.23
LINC00839-202ENST00000429940 ADAMTS1Q9UHI8 967 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 LEMD3Q9Y2U8 911 aa16.5■□□□□ 0.23
LINC00839-202ENST00000429940 NR1D1P20393 614 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 LSP1P33241 339 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 GUCY1A3Q02108 690 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 ASIC2Q16515 512 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 POLD4Q9HCU8 107 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 DDX25Q9UHL0 483 aaKnown RBP16.49■□□□□ 0.23
LINC00839-202ENST00000429940 RAD51CO43502 376 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 MARCH6O60337 910 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 EPS15P42566 896 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 TRADDQ15628 312 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 PPP4R3AQ6IN85 833 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 KLHL7Q8IXQ5 586 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 TAF4BQ92750 862 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 GJA10Q969M2 543 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 GPR101Q96P66 508 aaPredicted RBP16.49■□□□□ 0.23
LINC00839-202ENST00000429940 AIPL1Q9NZN9 384 aa16.49■□□□□ 0.23
LINC00839-202ENST00000429940 ATXN2Q99700 1313 aaKnown RBP16.49■□□□□ 0.23
LINC00839-202ENST00000429940 KIAA0754O94854 1291 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 MARSP56192 900 aaKnown RBP16.48■□□□□ 0.23
LINC00839-202ENST00000429940 GRAPQ13588 217 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 R3HDM1Q15032 1099 aaKnown RBP16.48■□□□□ 0.23
LINC00839-202ENST00000429940 UBE2SQ16763 222 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 EMC10Q5UCC4 262 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 GRAPLQ8TC17 118 aaPredicted RBP16.48■□□□□ 0.23
LINC00839-202ENST00000429940 ATP6V1G3Q96LB4 118 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 EPN3Q9H201 632 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 ATF5Q9Y2D1 282 aaPredicted RBP16.48■□□□□ 0.23
LINC00839-202ENST00000429940 GPR75-ASB3A0A0A6YYF3 556 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 NOVP48745 357 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 ASPRV1Q53RT3 343 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 MAATS1Q7Z4T9 603 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 SPATS2Q86XZ4 545 aaKnown RBP16.48■□□□□ 0.23
LINC00839-202ENST00000429940 CCDC65Q8IXS2 484 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 HAS1Q92839 578 aa16.48■□□□□ 0.23
LINC00839-202ENST00000429940 KCNK3O14649 394 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 GUCY2CP25092 1073 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 CHRNA5P30532 468 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 FBXW10Q5XX13 1052 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 LRRC47Q8N1G4 583 aaKnown RBP16.47■□□□□ 0.23
LINC00839-202ENST00000429940 NT5C3AQ9H0P0 336 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 GANQ9H2C0 597 aa16.47■□□□□ 0.23
LINC00839-202ENST00000429940 TAF1DQ9H5J8 278 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms