RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 RALGAPA2Q2PPJ7 1873 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 NLRC5Q86WI3 1866 aa17.11■□□□□ 0.33
MSH5-208ENST00000429846 SPDYE3A6NKU9 549 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 MAFGO15525 162 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 CTSHP09668 335 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 KCNA2P16389 499 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 TCF7P36402 384 aaPredicted RBP17.1■□□□□ 0.33
MSH5-208ENST00000429846 ARHGAP4P98171 946 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 SP4Q02446 784 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 NECTIN1Q15223 517 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 FAM26DQ5JW98 314 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 UTP14CQ5TAP6 766 aaKnown RBP17.1■□□□□ 0.33
MSH5-208ENST00000429846 CREB3L3Q68CJ9 461 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 TAF2Q6P1X5 1199 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 RPAINQ86UA6 219 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 FBXO22Q8NEZ5 403 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 EHMT1Q9H9B1 1298 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 ANO2Q9NQ90 1003 aa17.1■□□□□ 0.33
MSH5-208ENST00000429846 ITGB5P18084 799 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 RXRAP19793 462 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 MTMR1Q13613 665 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 RNF20Q5VTR2 975 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 FANCBQ8NB91 859 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 SEPT1Q8WYJ6 367 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 TOP1MTQ969P6 601 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 YME1L1Q96TA2 773 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 IFIH1Q9BYX4 1025 aaKnown RBP17.09■□□□□ 0.33
MSH5-208ENST00000429846 ERAP1Q9NZ08 941 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
MSH5-208ENST00000429846 RPLP2P05387 115 aaKnown RBP17.08■□□□□ 0.32
MSH5-208ENST00000429846 SYNE3Q6ZMZ3 975 aa17.08■□□□□ 0.32
MSH5-208ENST00000429846 RSPH3Q86UC2 560 aa17.08■□□□□ 0.32
MSH5-208ENST00000429846 MICU3Q86XE3 530 aa17.08■□□□□ 0.32
MSH5-208ENST00000429846 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.32
MSH5-208ENST00000429846 NECAB3Q96P71 396 aaPredicted RBP17.08■□□□□ 0.32
MSH5-208ENST00000429846 C1QTNF1Q9BXJ1 281 aa17.08■□□□□ 0.32
MSH5-208ENST00000429846 RBM28Q9NW13 759 aaKnown RBP17.08■□□□□ 0.32
MSH5-208ENST00000429846 XIRP2A4UGR9 3374 aa17.08■□□□□ 0.32
MSH5-208ENST00000429846 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.07■□□□□ 0.32
MSH5-208ENST00000429846 hCG_1984214I3L0E3 225 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 ATP9AO75110 1047 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 COL9A1P20849 921 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 PPFIA1Q13136 1202 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 PTPROQ16827 1216 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 PPP1R18Q6NYC8 613 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 ZNF713Q8N859 430 aaPredicted RBP17.07■□□□□ 0.32
MSH5-208ENST00000429846 C17orf80Q9BSJ5 609 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 SMARCAD1Q9H4L7 1026 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 TUBE1Q9UJT0 475 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 PCDHA6Q9UN73 950 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 TELO2Q9Y4R8 837 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 PCDHA8Q9Y5H6 950 aa17.07■□□□□ 0.32
MSH5-208ENST00000429846 MBLAC1A4D2B0 266 aaPredicted RBP17.06■□□□□ 0.32
MSH5-208ENST00000429846 COL9A3Q14050 684 aaPredicted RBP17.06■□□□□ 0.32
MSH5-208ENST00000429846 UBE2SQ16763 222 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 APOA5Q6Q788 366 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 HEATR3Q7Z4Q2 680 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 CCDC82Q8N4S0 544 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 GLG1Q92896 1179 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 TNPO1Q92973 898 aaKnown RBP17.06■□□□□ 0.32
MSH5-208ENST00000429846 LRRC2Q9BYS8 371 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 JADE2Q9NQC1 790 aa17.06■□□□□ 0.32
MSH5-208ENST00000429846 CNTNAP5Q8WYK1 1306 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 GSTTP1A0A1W2PQM5 241 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 hCG_1642624A0A1W2PR95 340 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 GRIK4Q16099 956 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 EPC2Q52LR7 807 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 TIGD5Q53EQ6 642 aa17.05■□□□□ 0.32
MSH5-208ENST00000429846 MRPL38Q96DV4 380 aaKnown RBP17.05■□□□□ 0.32
MSH5-208ENST00000429846 UBE2ZQ9H832 354 aaPredicted RBP17.05■□□□□ 0.32
MSH5-208ENST00000429846 JPH1Q9HDC5 661 aaPredicted RBP17.05■□□□□ 0.32
MSH5-208ENST00000429846 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.04■□□□□ 0.32
MSH5-208ENST00000429846 RRN3P2A6NIE6 340 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 H3BNC9 293 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 FOSP01100 380 aaPredicted RBP17.04■□□□□ 0.32
MSH5-208ENST00000429846 CHRNA1P02708 482 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 MARK3P27448 753 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 MGAT3Q09327 533 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 RUFY4Q6ZNE9 571 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 RAB11FIP4Q86YS3 637 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 NEK1Q96PY6 1258 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 OSBPL7Q9BZF2 842 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 GLT8D2Q9H1C3 349 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 AZI2Q9H6S1 392 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 RIC8AQ9NPQ8 531 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 SLC9A2Q9UBY0 812 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 RWDD3Q9Y3V2 267 aa17.04■□□□□ 0.32
MSH5-208ENST00000429846 NFASCO94856 1347 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 UPP2O95045 317 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 GHRP10912 638 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 RCAN1P53805 252 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 NAPAP54920 295 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 TSGA10IPQ3SY00 556 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 TMEM192Q8IY95 271 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 IL17RAQ96F46 866 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 MXRA8Q9BRK3 442 aa17.03■□□□□ 0.32
MSH5-208ENST00000429846 SDF4Q9BRK5 362 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms